Pseudomonas qingdaonensis: KH389_02880
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Entry
KH389_02880 CDS
T07622
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
pqi
Pseudomonas qingdaonensis
Brite
KEGG Orthology (KO) [BR:
pqi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pqi03000
]
KH389_02880
Transcription factors [BR:
pqi03000
]
Prokaryotic type
Helix-turn-helix
Other families
KH389_02880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_lid_14
GAF
HTH_8
HTH_23
HTH_17
HTH_30
AAA_5
HVO_A0261_N
AAA_2
HTH_50
HTH_29
Xre-like-HTH
HTH_28
RWP-RK
HTH_22
HTH_7
HTH_20
IclR_C
MerR
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
QVL19549
UniProt:
A0ABX8DTH5
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All DBs
Position
624427..626292
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AA seq
621 aa
AA seq
DB search
MLAANSRAHVDCVSRVLKNADRQPQAPVPPLILDSWRRSMEQHRLDPSSQQGPRILSQTL
LNECRERAELFMRIASDAVARLHERVRGADYCVLLTDAQGRTIDYRVDAALRNDCRKAGL
YLGTCWSEGEEGTCGVAAVLTSQVPVTVHKRDHFRAAFIGLTCSAAPVFDPQGKLLGVVD
VSALQSPDDRRSQHLIRQLVVQTAREIENAFFMHNAQAHWVLRAHSAPGYVDSQPDFLLA
WDADGRLQALNSLARSALLSRYGELPAHIGQLFDLDQLRAVTDESAQRLSWRADGDALHV
RVSSPQRPARVVPVPGGVDARVEESLRLAVRVKNCNLAVLVLGETGAGKEVFARQLHERS
ARAGKPFVALNCAAIPESLIESELFGYVAGAFTGASSKGMRGLLQQADGGTLFLDEIGDM
PLALQTRLLRVLAEGEVAPLGAARRERVDIQVICATHRDLAARVADGRFREDLYFRLANA
RFELPPLRERSDRLALINRLLAEEAAGCGVDVGLSEAALECLLGYRWPGNLRQLRQVLRY
ACAVCAGGTLQLQDLPADVRGAQVQGQVQASMSPQRQVLLEALVRHRWKPGEAAKALGIS
RATLYRRVHAHGIEMPRMGRD
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgcttgccgcgaactccagagcccacgtcgactgtgtcagccgtgtgctcaagaatgcc
gaccgccagccccaggcgccggtaccgccgttgatcctcgactcctggcgccgctcgatg
gagcagcaccgcctcgacccttcctcgcagcaagggccgcgcatcctgtcgcaaaccctg
ctcaacgaatgccgcgaacgcgccgagctgttcatgcgcattgccagtgatgcggtggcg
cgcctgcacgagcgggtgcgcggtgccgactactgcgtgctgctgaccgacgcgcagggt
cgcaccatcgactaccgcgtcgacgccgcgctgcgcaacgactgccgcaaggccggcctg
tacctgggcacctgctggtcggaaggcgaggagggcacctgcggggtggcggcggtactg
accagccaggtgccggtcacggtgcacaagcgcgatcactttcgcgccgcgttcatcggc
ctgacctgctcggcggcgccggtgttcgacccgcagggcaagctgctgggggtggtcgac
gtgtcggcgctgcagtcgccggacgaccggcgcagccagcacctgatccgccaactggtg
gtgcagaccgcgcgggagatcgagaacgcgtttttcatgcacaacgcccaggcgcattgg
gtgctgcgggcgcacagcgcgccggggtatgtggacagccagccggactttctgctggcc
tgggatgccgacggacgcctgcaggcgctcaacagcctggcgcgctcggcattgctctcg
cgctacggcgagctgccggcgcatatcggccagctgttcgacctggaccagttgcgcgcg
gtgaccgacgagtcggcccagcgcctgagctggcgcgccgatggcgatgcgctacatgtg
cgggtcagctcgccacagcgtccggcgcgggtggtgccggtgccgggcggggtggatgca
cgggtggaggaaagcctgcgcctggcggtgcgggtcaagaactgcaacctggcggtgctg
gtgttgggcgagaccggtgcgggcaaggaggtgttcgcgcgtcagctgcatgaacgcagc
gcgcgggccggcaagccgttcgtggcgctcaactgcgcggcgattcccgagagcctgatc
gagagcgagctgttcggctatgtggccggggcgtttaccggggcctccagcaagggcatg
cgcgggctgctgcagcaggccgatggcggcacgctgtttctcgacgagatcggcgacatg
ccgctggccttgcagacccgcctgctgcgggtgctggccgaaggcgaggtggcgccgctg
ggtgcggccaggcgcgagcgtgtggatatccaggtgatctgcgccacgcaccgcgacctg
gcggcgcgggtggccgacgggcgctttcgcgaagacctgtactttcgtctggccaatgcg
cgcttcgagctgccgccgctgcgcgagcgcagtgaccggctggccttgatcaatcgcttg
ctggccgaggaggcggccggttgcggggtggacgtgggcttgagcgaggcagcgctggag
tgcctgctggggtatcgctggccgggtaacctgcgccagttgcgccaggtgctgcgttac
gcctgcgcggtgtgcgccggtggcacgctgcagttgcaggacctgccggcggatgtgcgc
ggggcgcaggtgcagggccaggtgcaggccagcatgagcccgcagcgccaggtgctgctg
gaggcgctggtacgccatcgctggaaaccgggggaggcggccaaggcgctgggtatttcg
cgggccaccttgtaccggcgggtgcatgcgcatggcatcgagatgccgcgcatggggcgg
gactag
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