Pseudomonas qingdaonensis: KH389_03215
Help
Entry
KH389_03215 CDS
T07622
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
pqi
Pseudomonas qingdaonensis
Pathway
pqi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pqi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
KH389_03215 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pqi03400
]
KH389_03215 (recC)
Enzymes [BR:
pqi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
KH389_03215 (recC)
DNA repair and recombination proteins [BR:
pqi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
KH389_03215 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
QVL19609
LinkDB
All DBs
Position
702378..705857
Genome browser
AA seq
1159 aa
AA seq
DB search
MPHASTLQPGFMVVHGNHLDELRGLVVSLMRRYPLAPLENEMVLVQSNGIAQWLKLALAE
DPQDDDQGGCGIAAAIDVQLPGSFMWQLYRRVLGREEIPETSPLDKAPLTWRLMRLLPEV
INQPHFEPLQRFLTDDSDLRKRYQLAERLADLFDQYQVYRADWLKDWAAGRHVLSNARGD
SRALAPANCWQAELWRALLLDVGEEGMAQSRAGVHQRFVERINALEQAPKGLPSRVIVFG
ISSLPAQALEALAGLARFSQVLLCVHNPCRHHWADIVADKDLLRHQYKRQQRKQGMPSLI
DADTLHQHAHPLLAAWGKQGRDYINLLDSYDDPGSYRNVFSDGRIDLFTENGQATLLNQL
QDDILELRPLVETRALWPAVDPAKDRSVRFHVAHSAQREVEILHDQLLARFSADPGLRPR
DVIVMLPDINTYAPHIRAVFGQLGRNDPRYIPFTLTDQGQRGRDPLLIALEHLLKLPDSR
FPVSEILDLLDVPALRARFAIKESDLPTLHRWIEGAGVRWGLNAQQRAGLGLPDDLEQNS
WRFGLRRMLLGYAVGTGDSCDDIEPYDEIGGLDAALIGPLVALLDALEVAHAELSQPAPA
AQWGTRLHALLQVFFLAETEHDDYLLVQLQGLCETWLQTCESVGLEDALPLTVVREAWLA
GLDQGRLSQRFLAGSVNFCTLMPMRAIPFKVVCLLGMNDGDYPRAQPPLDFDLMGSDYRP
GDRSRREDDRYLLLEALLSAREQLYVSWVGRSIRDNSERPASVLIGQLRDHLAAGWRSPK
AKADDPVEGGLQLLHALTQEHPLQPFSARYFHKHSNLFSYASEWRALHLPPTQLPTEADQ
LEPFVPEEPLSLTLLQDFMRHPVRHFFSQRLKVFFEAAEAPLADEEPFVLDALQRYSLSE
SLLGAALADPTNSTDALQAQARRLQRSGMLPLAGFGECLQAELIEPLPDLLLRHAQLLGQ
WPTLIDSALPISFEYRQLRLEGWLGRVYQRDDQALLSITTLPNGISSGKSLKWHRLVATW
VMHLAACAVGHRLSSAVVATDVTLLLDPLEQPRAAELLGDLLVARQAGMNAPLPVAIKTA
FTWLGQSDPEKALAAAAKAYDGDGQNTRGERSESTALARQFSDFAALTASEEFEGWCEAL
YRPMFEAAWQRLGSEEAHP
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atgccgcatgcaagcacgcttcaaccgggattcatggtcgttcacggcaaccacctggat
gaactgcgtggcctggtggtgagcctgatgcggcgttacccgctggcacccctggaaaac
gagatggtgctggtgcagagcaacggtatcgcccagtggctcaagctggccctggccgaa
gacccgcaggacgatgaccagggcggttgcggcatcgcggccgccatcgatgtgcaattg
cctggtagcttcatgtggcagctgtaccgccgggtacttggccgcgaagagattcctgaa
acctccccgctcgacaaggcgcccttgacctggcgcctgatgcgcctgctgccggaagtg
atcaaccagccgcatttcgagccgttgcagcgctttcttaccgatgacagcgacctgcgc
aagcgctaccagctggccgagcgccttgccgacctgttcgaccaataccaggtgtaccgt
gccgattggctgaaggactgggcagccggacgtcacgtgctgagcaacgctcgtggcgac
tcccgtgcgctggcccccgccaactgctggcaggcagagctgtggcgtgccttgctgctg
gatgtgggggaggaaggcatggcccagagccgtgccggcgtgcaccagcgtttcgtcgag
cgcatcaatgcactggaacaagcccccaagggcctgccatcgcgggtcatcgtgttcggc
atttcttcgttgccggcccaggcccttgaagcgctggcaggcctggcacgtttcagccag
gtgctgctatgcgtgcacaacccctgccgtcaccactgggccgatatcgtcgccgacaag
gacctgctgcgccatcagtacaagcgccagcagcgcaagcaaggcatgcccagcctgatc
gacgccgacaccctgcaccagcatgcccatccgctgcttgcggcctggggcaagcagggc
cgggactacatcaacctgctcgacagctacgatgacccgggcagctatcgcaatgtgttc
agtgacgggcgcatcgacctgttcaccgaaaacgggcaggccactctgctcaaccagttg
caggacgacattctcgaactgcgcccattggtcgagacccgcgccttgtggcccgccgtc
gacccggccaaggaccgctcggtgcgttttcatgtggcccacagcgcgcagcgcgaggtc
gagatcctgcacgaccagttgctcgcccgcttcagcgccgatcccggtctgcgcccgcgc
gacgtgatcgtgatgctgccggacatcaacacctatgcgccccacatccgcgccgtgttc
ggccagcttgggcgcaacgacccgcgctacattcccttcaccctgaccgaccagggccag
cgcggccgcgacccgctgctgattgccctggagcacctgctcaagttgccggacagccgc
ttcccggtgagcgagattctcgatctgctggatgttcccgccctgcgtgcccgcttcgcg
atcaaggaaagcgacctgcccacgctgcaccgctggatcgaaggggccggcgtgcgctgg
ggcctcaatgcacagcagcgtgccggcctgggcctgcccgatgacctcgagcagaacagc
tggcgattcggcctgcgccgcatgctgctgggctatgcggtgggcacgggcgacagctgc
gacgatatcgaaccctatgatgaaatcggcggcctcgatgctgccctgatcggcccgctg
gtggccctgctcgatgcgctcgaggtggcccatgccgagctctcgcagccggcaccggcg
gcgcaatggggcacgcgcctgcatgccctgctgcaggtgttcttcctggccgaaaccgaa
cacgatgactacctgctggtgcaactgcagggcctgtgcgaaacctggctgcaaacctgc
gagtcggtcgggctcgaggacgccttgccgttgacggtggtgcgcgaagcctggctcgcc
ggcctggaccaggggcgcttgtcccagcgctttctggccggctcggtgaacttctgcacc
ctgatgcccatgcgtgccatccccttcaaggtggtgtgcctgctgggcatgaacgatggt
gactacccgcgtgcgcagccgccgctggacttcgacctgatgggcagcgactaccgcccc
ggcgaccgctctcgacgcgaggacgaccgttacctgctgctcgaagccttgctgtcggcg
cgtgagcaactgtacgtcagctgggtgggccgcagcattcgcgacaacagcgagcggccg
gcgtcggtgctcatcggccagttgcgcgatcacctcgccgccggctggcgcagccccaag
gccaaggccgacgaccctgtggagggcggtctgcaactgttgcacgccttgacgcaggaa
caccccctgcaaccgttcagcgcccgctacttccacaagcacagcaacctgttcagctat
gccagcgaatggcgcgccctgcacctgccgccaacgcagctgccgaccgaggccgaccaa
ctggagcctttcgtgcccgaagagcccctgagcctgaccttgctccaggacttcatgcgc
caccccgttcggcacttcttcagccagcgcctgaaggtgttcttcgaagccgccgaagcc
cccctggccgacgaagagcccttcgtgctcgacgccctgcagcgctacagcctgagcgaa
agcttgctgggcgcagccctggccgaccccaccaacagcaccgacgccctgcaggcccag
gcccgtcgcctgcaacgcagcggcatgctgccgctggccggcttcggtgaatgcctgcag
gccgaactgatcgagccattgcccgacctgctgttgcgacacgctcaactgctcggccaa
tggccaaccctgatcgacagtgcgctgccgatcagcttcgagtatcgccagttgcggctc
gaaggctggctggggcgggtgtaccagcgtgacgaccaggcgctgctgagcatcaccacc
ttgcccaacggcatcagcagcggcaaatcgctcaagtggcaccgactggtggcgacctgg
gtcatgcacctggcagcgtgtgccgtggggcaccggttgagcagcgcagtggtcgccacc
gacgtgaccctgttgctcgacccgctggagcaaccgcgtgccgcggaactgctcggcgat
ctgctggtggcccggcaggccggcatgaatgcgccgctgccggtggcgatcaagaccgcc
ttcacctggctcggccagagtgaccctgaaaaagccctggcggccgcagccaaggcctac
gacggcgacggccagaacacccgcggcgagcgcagcgaaagcaccgcactggcccggcag
ttcagtgatttcgcggcgctgaccgcgagtgaagaattcgagggctggtgcgaggcactg
taccggccgatgttcgaagccgcctggcaacgcctgggcagtgaagaggcgcatccatga
DBGET
integrated database retrieval system
