Pseudomonas qingdaonensis: KH389_03445
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Entry
KH389_03445 CDS
T07622
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
pqi
Pseudomonas qingdaonensis
Brite
KEGG Orthology (KO) [BR:
pqi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pqi03400
]
KH389_03445 (radA)
DNA repair and recombination proteins [BR:
pqi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
KH389_03445 (radA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
Lon_C
DnaB_C
AAA_16
RecA
AAA_22
GvpD_P-loop
AAA
SLFN-g3_helicase
Rad51
DUF7125
nSTAND3
AAA_24
AAA_14
NTPase_1
MCM
ABC_tran
PAXNEB
AAA_29
DUF7129
Motif
Other DBs
NCBI-ProteinID:
QVL19654
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All DBs
Position
756577..757944
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AA seq
455 aa
AA seq
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MAKAKRMYGCTECGATFPKWAGQCGECGAWNTLVETMIESGGAAAPAGRTGWAGQQAQIK
TLAEVSVEEIPRFSTASAELDRVLGGGLVDGSVVLIGGDPGIGKSTILLQTLCNIATRMP
ALYVTGEESQQQVAMRARRLGLPQDQLRVMTETCIETIIATARVEKPKVMVIDSIQTIFT
EQLQSAPGGVSQVRESAALLVRYAKQSGTAIFLVGHVTKEGALAGPRVLEHMVDTVLYFE
GESDGRLRLLRAVKNRFGAVNELGVFGMTDRGLKEVSNPSAIFLTRAQEEVPGSVVMATW
EGTRPMLVEVQALVDESHMANPRRVTLGLDQNRLAMLLAVLHRHGGIPTHDQDVFLNVVG
GVKVLETASDLALMAAVMSSLRNRPLPHDLLVFGEVGLSGEVRPVPSGQERLKEAAKHGF
KRAIVPKGNAPKEAPPGLQVIAVTRLEQALDALFE
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggccaaggccaagcgcatgtacggctgcaccgagtgcggcgcgacctttcccaagtgg
gcgggccagtgcggcgaatgcggcgcgtggaacaccctggtcgagaccatgatcgaaagt
ggcggcgctgcggcgcctgccgggcgcaccggctgggccgggcaacaggcgcagatcaag
accctggccgaggtcagtgtcgaggagatcccgcgtttcagcaccgccagcgccgagctg
gaccgcgtgctcggtggcggcctggtcgatggatcggtggtgctgattggtggtgacccg
ggcatcggcaagtccaccatcctgctgcagaccctgtgcaacattgccacgcgcatgccg
gcgctgtacgtcaccggggaagaatcccagcagcaggtggccatgcgtgcccgtcgcctg
ggcctgccgcaggatcagttgcgggtgatgaccgagacctgcatcgaaaccatcattgcc
accgcgcgggtcgaaaagcccaaggtgatggtgatcgactccatccagaccatcttcacc
gaacagttgcagtcggcgcccggtggcgtgtcgcaggtacgcgagagtgccgccttgctg
gtgcgctatgccaagcagagcggcacggcgatcttcctggtcggccacgtgaccaaggag
ggcgcgttggccgggccgcgggtactggaacacatggtcgacaccgtgctgtatttcgag
ggcgagtccgacggtcgcctgcgcctgctgcgcgcggtgaagaaccgctttggtgcggtc
aacgagctgggcgtgttcggcatgaccgaccgcggcctcaaggaagtctccaacccgtcg
gcgatcttcctcacccgtgcccaggaggaagtgccgggcagcgtggtgatggccacctgg
gaaggtacccggccgatgctggtggaggtgcaggcgctggtggatgaaagccacatggcc
aacccgcgccgtgtgaccctgggcctggaccagaaccgcctggccatgttgctggcggtg
ctgcatcgccatggcggcatccccacccacgaccaggatgtgttcctaaacgtggtgggc
ggggtcaaggtactggagaccgcgtcggacctggccttgatggcggcggtgatgtcgagc
ttgcgcaaccgcccgctgccacacgacctgctggtgttcggcgaggtgggcctgtctggt
gaagtgcgcccggtgccgagcgggcaggagcgcctgaaggaggccgccaagcacggcttc
aagcgcgccatcgtgcccaagggcaacgcgcccaaggaagcgccgccggggctgcaggtg
attgcggtgacgcgcctggagcaggcgctggatgcgttgtttgaataa
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