Pseudomonas qingdaonensis: KH389_03520
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Entry
KH389_03520 CDS
T07622
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
KO
K11900
type VI secretion system protein ImpC
Organism
pqi
Pseudomonas qingdaonensis
Pathway
pqi02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pqi00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
KH389_03520 (tssC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pqi02044
]
KH389_03520 (tssC)
Secretion system [BR:
pqi02044
]
Type VI secretion system
Imp/Vas secretion system core components
KH389_03520 (tssC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VipB
VipB_2
VMAP-M0
Motif
Other DBs
NCBI-ProteinID:
QVL19665
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All DBs
Position
774326..775801
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AA seq
491 aa
AA seq
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MSTSAAQQTSSTDGEYSILDNIIAQTRLTPDDEAYDIAKRGVSAFIEELLKPHNDGEPVK
KAMVDRMIAEIDAKLSRQMDAILHHPDFQSLESAWRGLQLLVDRTNFRENIKIEILNVSK
QDLLDDFEDSPEVMQAGLYKHIYTAEYGQFGGQPVGAIIANYFMSPSSPDVKLMQYVSSV
ACMSHAPFIAAAGPKFFGLESFTGLPDLKDLKDHFEGPQFAKWQSFRQSEDARYIGLTVP
RFLLRNPYDPEENPVKSFVYKETVANSHEHYLWGNTAYAFGTKLTDSFAKFRWCPNIIGP
QSGGAVEDLPLHHFESMGEIETKIPTEVLVSDRREYELAEEGFISLTMRKGSDNAAFFSA
SSVQKPKFFGISAEGKAAELNYKLGTQLPYMMIVNRLAHYLKVLQREQLGSWKERTDLEL
ELNKWIRQYVADQENPSAEVRGRRPLRAAQIIVSDVEGEPGWYRVSLNVRPHFKYMGADF
TLSLVGKLDKE
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccagcgcagcacagcaaaccagcagcaccgatggcgagtacagcattctcgac
aacatcatcgcgcaaacccgcctgacgcccgacgatgaagcctatgacattgccaagcgc
ggcgtgtcggccttcatcgaagagctgctcaagccgcacaacgacggcgaaccggtcaag
aaggccatggtcgaccgcatgatcgccgagatcgatgccaagctcagccgccagatggac
gcgattctccaccaccccgacttccagtcgctggagtcggcctggcgtggcctgcagttg
ctggtcgaccgcaccaactttcgcgaaaacatcaagatcgaaattctcaacgtctccaag
caggacctgctggacgacttcgaggactcgcccgaagtcatgcaggccggtctctacaag
cacatctataccgcagagtacggccagttcggtggccagccggtgggcgcgatcatcgcc
aactacttcatgtcgcccagctcccccgacgtcaagctgatgcagtacgtctccagcgtc
gcgtgcatgtcccatgcgccgttcatcgccgctgccggtccgaagttcttcggcctcgaa
agcttcaccggcctgccggacctcaaggatctcaaggaccacttcgaaggcccgcagttt
gccaagtggcagagctttcgccagtccgaggacgcgcgctacatcggcctcaccgtgccg
cgcttcctgctgcgcaacccttatgacccggaggaaaacccggtcaagtcgttcgtctac
aaggaaaccgtggccaacagccacgagcactacctgtggggcaacaccgcctatgcgttc
ggcaccaagctgaccgacagcttcgccaagttccgctggtgcccgaacatcatcggcccg
cagagcggtggcgcggtggaagacctgccgctgcaccacttcgaaagcatgggcgagatc
gagaccaagatccccaccgaagtgctggtgtcggaccgccgcgagtacgagctggccgag
gaaggcttcatttccctgaccatgcgcaagggcagtgacaacgccgccttcttctccgcc
agttcggtgcagaaacccaagttcttcggcatcagcgccgagggcaaggccgccgagctg
aactacaagctcggtacccagctgccgtacatgatgatcgtcaaccgcctggcccactac
ctcaaggtactgcagcgcgagcagctgggctcgtggaaggagcgcaccgacctggagctg
gaactcaacaagtggatccgccagtacgtggccgaccaggagaacccgagcgccgaggtg
cgtgggcgtcgtccgctgcgcgcggcccagatcatcgtcagcgatgtggaaggggagccg
ggctggtaccgggtcagcctcaacgtgcgcccgcacttcaagtacatgggcgccgacttc
accctgtcgctggtcggcaagctggataaagagtaa
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