Pseudomonas qingdaonensis: KH389_03540
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Entry
KH389_03540 CDS
T07622
Symbol
tssH
Name
(GenBank) type VI secretion system ATPase TssH
KO
K11907
type VI secretion system protein VasG
Organism
pqi
Pseudomonas qingdaonensis
Pathway
pqi02025
Biofilm formation - Pseudomonas aeruginosa
pqi03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pqi00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
KH389_03540 (tssH)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
KH389_03540 (tssH)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pqi02044
]
KH389_03540 (tssH)
Secretion system [BR:
pqi02044
]
Type VI secretion system
Imp/Vas secretion system core components
KH389_03540 (tssH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
AAA
AAA_5
AAA_22
ClpB_D2-small
AAA_16
nSTAND3
TniB
Sigma54_activat
AAA_7
NACHT
Clp_N
AAA_25
AAA_24
Hpr_kinase_C
NBD_SMAX1
OEP
Motif
Other DBs
NCBI-ProteinID:
QVL19669
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Position
779054..781642
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AA seq
862 aa
AA seq
DB search
MNMITVDLQQLIQALDADTRRDLERCAERCVARGGSRILVEDLLLELLDRPEGLLERALH
DADVAPGELRATLQVQLEHSASRNPVFAPELVQWLQDALLVANLELGSSQVEQAALILAL
LRNPVRYAGSHYQPLLARLNIERLKGFALASRPVAAQGAAGGQGESMLQRFTHNLTQQAR
DGRLDPVLCRDQALRQMIDILARRRKNNPIVVGEAGVGKTAIVEGLALRIAAAEVPPALR
GVELLALDMGLLQAGASVKGEFERRLKGVIDEVKAAPRPVILFIDEAHTLIGAGGNAGGS
DAANLLKPALARGELRTIAATTWSEYKKYFEKDPALARRFQPVQLHEPTADEAVTILRGL
AQVYEKSHGIYLRDDAVVAAAHMSARYLAGRQLPDKAVDVLDTACARVRISLAAAPQRLE
RLRASLAEGERQVQAQQRDAEAGVGIDQEALHLLQAQLRSDQADQQAVQARWEQQRALAE
QVLDLRRQLAEAREQGNARDDVALLQASLETTRSLLEAAQAEERLVSFEVCPRLVAEVIS
AWTGVPLEQLAREHNARIMRFAEDLRARIRGQEQAVQALDRSMRANAAGLAKPDAPVGVF
LLVGPSGVGKTETALALADLLYGGERFITTINMSEFQEKHTVSRLIGAPPGYVGYGEGGM
LTEAVRQKPYSVVLLDEVEKADPDVLNLFYQIFDKGVANDGEGREIDFRNTLILMTSNLA
SEQIASLCQGAERPSAEQLEQAIRPALSRHFKPALLARMRVVPYYPVSGPVLRELVEIKL
QRFGQRLLRRQLGFTYAPALVEHLAERCTQGDSGARLIDHLLDLHLMPQVADRLLAAMAA
GESLQQVHATLDGDTGVRCEFA
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atgaacatgatcaccgtagacctgcaacaactcatccaggcgctggacgccgacacccgt
cgtgacctggagcgctgcgccgaacgttgcgtggcacgtggcggcagcaggatcctggtc
gaggacctgctgctggaattgctcgatcgccccgaaggccttcttgaacgggccttgcac
gacgccgacgtggcgccgggcgaactgcgcgccaccttgcaggtgcagcttgaacacagc
gcttcgcgcaacccggtgttcgcccccgaactggtgcagtggctgcaggatgcgctgctg
gtggccaacctcgaactgggcagcagccaggtcgaacaggctgcgctgatcctggcgctg
ctgcgcaaccccgtgcgctatgccggcagccattaccagccgctgctggcccgcctgaac
atcgagcgcctcaagggcttcgccctggcgtcccggccggttgcagcgcagggtgccgcg
ggcggccagggcgagtcgatgctgcagcgctttacccacaacctcacgcagcaggcccgc
gacggccgactcgacccggtactgtgccgcgatcaagcgctgcgccagatgatcgacatc
cttgcccggcggcgcaagaacaaccccatcgtggtgggcgaggccggtgtgggcaagacc
gccatcgtcgagggcctggcgctgcgcattgccgccgccgaagtgccgccggcactgcgc
ggggtagagctgctggcgctggacatgggcctgctgcaggccggcgccagcgtcaagggc
gagttcgagcgacgcctcaagggcgtgatcgacgaggtcaaggccgcgccccgaccggtc
atcctgtttatcgatgaagcccacaccctgatcggtgcgggcggcaacgccggcggttcg
gatgcggccaacctgctcaagcctgcactggcgcggggcgagctgcgcaccatcgccgcc
accacctggagcgagtacaagaagtacttcgagaaggacccggccctggcccggcgcttt
cagccggtacaactgcacgagccgacagcggacgaggcggtgaccatcctgcgcggcctg
gcccaggtgtatgagaagagtcacggtatctacctgcgcgatgatgcggtggtggcggcg
gcgcacatgtcggcgcgctacctggccgggcgacagttgccggacaaggcggtcgatgtg
ctcgacaccgcttgtgcccgggtgcgcatcagcctggccgccgcgccgcaacgcctggaa
cgcctgcgtgcctcgctggccgagggcgagcggcaggtgcaggcgcagcagcgcgacgcc
gaagccggcgtgggtatcgaccaagaggcgctgcacctgttgcaggcgcaactgcgcagc
gaccaggccgaccagcaggccgtgcaggcgcgctgggaacagcagcgcgcgctggccgag
caggtgctggacctgcgccggcagttggccgaagcccgcgagcagggcaatgcacgggat
gacgtggccttactgcaggccagcctggagaccacccgcagcctgctggaagcggcgcag
gccgaagagcgcctggtcagcttcgaagtgtgcccgcgcctggtggccgaagtgatcagt
gcctggaccggcgtgccgctggagcaactggcccgcgagcacaacgccaggatcatgcgc
tttgccgaagacctgcgtgcgcgtatccgtggtcaggagcaggccgtgcaggcactggac
cgctcgatgcgggccaacgcagccggcctggcaaagcccgatgcgccggtcggggtgttc
ctgctggtggggcccagtggcgtgggcaagaccgaaacggccctggccctggccgacctg
ctgtatggcggcgagcgcttcatcaccaccatcaacatgtccgagttccaggagaagcac
accgtgtcgcggctgatcggcgcgccgcccggttacgtcggctatggcgagggcggcatg
ctcaccgaggcggtgcgccagaagccctattccgtggtgctgctggatgaggtcgagaag
gccgacccggacgtgctgaacctgttctaccagatcttcgacaagggcgtggccaacgac
ggcgaggggcgcgaaatcgactttcgcaacaccctgatcctgatgacctccaacctggcc
agcgagcagatcgcgagcctttgccaaggcgccgaacggccctctgccgagcagctggaa
caggccatacgccccgccttgagcaggcatttcaaaccggccttgctggcgcgcatgcgt
gtggtgccgtactacccggtgagcggcccggtgctgcgcgagctggtcgagatcaagctg
cagcgctttggccagcggctgctgcgccggcaactgggtttcacctatgccccggcgctg
gtcgagcacctggccgagcgttgcacccagggcgacagcggcgcgcggctgatcgaccac
ctgctcgacctgcacctgatgccgcaggtggctgaccggctgctggcagcgatggcggcc
ggggagtcgttgcagcaggtgcatgccacgctcgatggcgatacgggcgtgaggtgcgag
tttgcctga
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