Pseudomonas qingdaonensis: KH389_03565
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Entry
KH389_03565 CDS
T07622
Symbol
tssK
Name
(GenBank) type VI secretion system baseplate subunit TssK
KO
K11893
type VI secretion system protein ImpJ
Organism
pqi
Pseudomonas qingdaonensis
Pathway
pqi02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pqi00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
KH389_03565 (tssK)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pqi02044
]
KH389_03565 (tssK)
Secretion system [BR:
pqi02044
]
Type VI secretion system
Imp/Vas secretion system core components
KH389_03565 (tssK)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T6SS_VasE
Motif
Other DBs
NCBI-ProteinID:
QVL19674
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All DBs
Position
785091..786422
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AA seq
443 aa
AA seq
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MHVHKVIWQEGMLLRPQHFQHNDRYYDYQMKTRTQLLGSYNWGFLSLEIDQQFLSMGKLV
VSQASGVLPDGSLFELSSNIEPLALDIPPNTGNTPVFLALPLVTGNHIETRRLEQSDVLA
RYIAYETPVSDSNAGDDINSDISCARPDFRLLLGEQQGDQAYVKLKLCAVLDTTPDGVIS
LDPEFVPTFIHTHASSYLLSCLKEVISMLGHRGDTIAERIRSNGKVGGAEVGDFMMLQLI
NRTELLLRHYLGLDQLHPEELYRTLLTMLGDLATFASDTKRPRTDSRYQHSDQGASFRRL
MDGIREVLSMVLEQHAIELDLQTRQYGILVAAVHDQTLLASASFVLAASANCDSETLRTR
LPSHLKVGPVERIRQLVNLHLPGIKVVPLPVAPRQIPFHSNKTYFLLEFNAEDQALLERS
GGFAFHVSGEFAELELKFWAIRN
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgcatgtgcacaaagtcatttggcaggaaggcatgctgctgcgtccgcagcacttccag
cacaacgatcgctactacgattaccagatgaaaacccgcacccagctgctgggcagctac
aactggggttttctcagcctggagatcgaccagcagttcctgagcatgggcaagctggtg
gtcagccaggccagcggtgtgctgcccgacggcagcctgttcgagctcagcagcaacatc
gagccgctggccctggacataccgcccaacaccggcaacacgccggtgttcctggcactg
ccgctggtgaccggcaaccacatcgagacccggcgactggagcagtccgatgtgctggcg
cgctacatcgcctacgagaccccggtcagcgactccaacgccggtgacgacatcaacagc
gacatcagctgtgcacggccggactttcgcctgctgctgggcgagcagcagggcgatcag
gcctacgtcaagctcaagctgtgcgccgtgctcgacaccaccccggacggcgtgatcagc
ctggaccccgagttcgtgccgaccttcattcacacccacgcgtcaagctacctgctgtcg
tgcctcaaggaggtgatcagcatgctcggccaccgtggcgacaccattgccgagcgcatc
cgttccaacggcaaggtcggcggcgcggaggtgggcgacttcatgatgctgcaactgatc
aatcgcaccgaactgctgctgcgtcactacctgggcctggaccagctgcaccccgaggag
ctgtaccgcaccctgctgaccatgctgggggacctggcgacctttgccagcgacaccaag
cgcccgcgtaccgacagccgttatcagcacagcgatcagggcgcgagctttcgccggctg
atggacggcatacgcgaggtgctgtcgatggtgctggaacagcacgccatcgaactggac
ctgcaaacccgccagtacggcatcctggtggccgccgtgcacgaccagacgctgctcgcc
tcggcctcgttcgtactggccgccagcgccaactgcgacagcgagaccctgcgcacgcgc
ctgccctcgcacctcaaggtcggcccggtggaacgtatccggcaactggtcaacctgcac
ctgcctggcatcaaggtggtgccgttgccggtggcgccgcggcagatcccgttccattcc
aacaagacctacttcctgctcgaattcaacgccgaagaccaggccctgctggagcgctcc
ggtggttttgccttccacgtctcgggcgagttcgccgagctcgaactgaaattctgggcc
atcaggaactga
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