Pseudomonas qingdaonensis: KH389_03905
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Entry
KH389_03905 CDS
T07622
Name
(GenBank) OsmC domain/YcaO domain-containing protein
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
pqi
Pseudomonas qingdaonensis
Brite
KEGG Orthology (KO) [BR:
pqi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pqi03009
]
KH389_03905
Ribosome biogenesis [BR:
pqi03009
]
Prokaryotic type
ribosomal protein modification factors
KH389_03905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YcaO_C
YcaO
OsmC
Motif
Other DBs
NCBI-ProteinID:
QVL19737
LinkDB
All DBs
Position
complement(864817..867021)
Genome browser
AA seq
734 aa
AA seq
DB search
MEIKVNFLDNLRLEAKFDDFTVVADQPIRYKGDGSAPGPFDYFLASSALCAAYFVKLYCE
TRNIPTDNIRLSQNNIVDPENRYNQIFKIQVELPADISAKDRQGILRSIDRCTVKKVVQT
GPEFVIEEVDNLDADAQALLMLDAQAQTRTVIAGKDLPLEQTIANMSGILARLGMKIEIA
SWRNIVPNVWSLHIRDAHSPMCFTNGKGATKEGALASALGEFIERLNCNFFYNDQFWGED
IANADFVHYPDERWFKPGRKDALPAEILDAHCRDIYNPDGELRGSHLYDTNSGNTERGIC
ALPFVRQSDGEVVYFPSNLIENLYLSNGMSAGNTLAEAQVQCLSEIFERAVKREILEGEL
ALPDVPQDVIAKYPGILAGIQGLEAQGFPVLVKDASLGGEFPVMCVTLMNPRTGGVFASF
GAHPSFEVALERSLTELLQGRSFEGLNDLPQPTFESQAVTEPNNFVEHFIDSSGVVSWRF
FSARADFEFVEWDFSGQGENSNAEEAATLFGILEGMDKEVYMAVYEHLGATACRILVPGY
SEIYPVDDLVWDNTNKALLFRADILNLHRLDDDALQALVERLEDSELDDYTDITTLIGIE
FDDNTVWGQLTILELKLLIHLALERFEEAKELVETFLQYNDNTVERGLFYQALNVVLEVV
LDDEMALEDYAVNFRRMFGDERMDAVLGSVDGRVRFYGLTPTSMKLEGLDRHLRLIDSYK
KLHAARARAVAGTR
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcaaggtcaattttctcgacaaccttcgacttgaagccaagttcgatgacttc
acggtggtggccgaccaacccatccgctacaagggcgatggttcggcacccggcccgttc
gactatttcctggcctcctcggccctgtgcgcggcctacttcgtcaagctgtactgcgaa
acgcgcaacatccccaccgacaacattcgcctgtcgcagaacaacatcgtcgacccggaa
aaccgctacaaccagatcttcaagatccaggtcgagctgccggccgacatctcggccaag
gaccgccagggcatcctgcgttccatcgaccgctgcaccgtgaagaaggtggtgcagacc
ggtcccgagttcgtgatcgaggaagtcgacaacctcgatgccgacgcccaggccctgctg
atgctggacgcccaggcgcagacgcgtaccgtgatcgccggcaaggacctgccgctggaa
cagaccatcgccaacatgtcgggcatcctcgccaggcttgggatgaagatcgagatcgcc
tcgtggcgcaacatcgtgcccaacgtctggtcgctgcacatccgcgatgcgcattcaccc
atgtgcttcaccaacggcaagggcgcaaccaaggaaggcgcactggcctcggcactgggc
gagttcatcgaacgcctgaactgcaacttcttctacaacgaccagttctggggcgaggac
atcgccaacgccgacttcgtgcactaccccgacgagcgctggttcaagccgggccgcaag
gacgcgctgccggccgagatcctcgacgcccactgccgcgacatctacaaccccgacggc
gaactgcgtggctcgcacctgtacgacaccaactcgggcaacaccgagcgtggcatctgc
gccctgcccttcgtgcgccagtccgatggcgaggtggtgtacttcccgtccaacctgatc
gaaaacctgtacctgagcaacggcatgagcgccggcaacacgctggccgaggcgcaggtg
cagtgcctgtcggagatcttcgagcgcgcggtcaagcgcgagatcctcgaaggcgagctg
gccctgcccgacgtgccgcaggacgtcatcgccaagtaccccggcatcctcgccggcatc
cagggcctggaggcccagggcttcccggtgctggtcaaggatgcgtcgctgggcggtgag
ttcccggtgatgtgcgtgaccctgatgaacccgcgcaccggcggcgtgttcgcctcgttt
ggcgcgcacccaagctttgaagtggcgctggaacgcagcctcaccgagctgctgcaaggg
cgcagcttcgagggtctgaatgacctgccgcagccgaccttcgaaagccaggcggtgacc
gagccgaacaacttcgtcgagcacttcatcgactccagcggcgtggtgtcgtggcgcttc
ttcagtgccagggccgacttcgagttcgtcgagtgggacttctccggccagggtgaaaac
tccaacgccgaagaagctgccaccctgttcggcatcctcgaaggcatggacaaggaagtg
tacatggcggtgtacgagcacctgggtgccaccgcctgccgcatcctggtaccgggctac
tcggagatctacccggtcgacgacctggtgtgggacaacaccaacaaggcgctgctgttc
cgtgccgacatcctcaacctgcaccgcctggacgatgacgccctgcaagcgctggtcgag
cgcctcgaagacagcgaactggacgactacaccgacatcaccacactgatcggcatcgag
ttcgacgacaacacggtgtggggtcagttgaccatcctggagctcaagctgctgattcac
ctggcgctggagcgtttcgaggaggccaaggagctggtggagaccttcctgcagtacaac
gacaacaccgtcgagcgcgggttgttctaccaggcgttgaacgtggtgctggaagtggtg
ctggacgacgagatggcgcttgaagactacgccgtcaacttccggcgcatgttcggggac
gagcgcatggatgccgtactgggctcggtggatggccgcgtgcgtttctacggcctgacc
cccaccagcatgaagctcgaaggtctggaccgtcacctgcgcctgatcgacagctacaag
aagctgcacgcggcacgtgcccgtgcggtagcgggcacacgctga
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