Pseudomonas qingdaonensis: KH389_03985
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Entry
KH389_03985 CDS
T07622
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
pqi
Pseudomonas qingdaonensis
Brite
KEGG Orthology (KO) [BR:
pqi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pqi03400
]
KH389_03985 (phrB)
Enzymes [BR:
pqi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
KH389_03985 (phrB)
DNA repair and recombination proteins [BR:
pqi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
KH389_03985 (phrB)
Prokaryotic type
KH389_03985 (phrB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
DUF7433
Motif
Other DBs
NCBI-ProteinID:
QVL19751
UniProt:
A0ABX8DTW9
LinkDB
All DBs
Position
complement(880317..881744)
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AA seq
475 aa
AA seq
DB search
MQLIWLRNDLRVHDNTALAAACSRGPTLAVWLVSPGQWLAHDDAPCKVDFWLRNLHSLRQ
SLDALNIPLLIVHADQWADAPRVLLALCRQHAVSAVHLNEEYGVHEQRRDQAVQQALRQA
DIQVHSYLDQLLFKPGSILTRSGGYFQVFSQFRKVCYERLHLGLPSRVAAPAAQARLAIA
SDTVPTQVAGFETPPDALRTLWPAGEDEAARRLARFVDEAIEDYPVQRDLPAVPGTSQLS
AYLAAGVISPRQCLHAALACNFGEFDSGNAGAITWINELLWREFYKHILVGYPQVSRHRA
FKSHTEALPWRNAPQDLLAWQQGRTGIPIVDAAMRQLLATGWMHNRLRMVTAMFLTKNLL
IDWREGERFFMRHLIDGDLAANNGGWQWSASTGTDAVPYFRIFNPVSQSQRFDPAGRFLK
HWLPERGNLDHKAVHLPNVQNDLFAIDVYPHAIVDLSSSRQRALDAFKHLPKRND
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgcaactgatctggctgcgcaacgacttgcgcgttcacgacaacactgcgctggccgct
gcctgctcgcgcgggcccaccctggcggtgtggctggtaagccccgggcagtggctcgcc
cacgacgacgccccgtgcaaggtggacttctggctgcgcaacctgcacagcctgcgccag
tcactggacgccctgaacattcccctgctgattgtgcatgccgaccagtgggccgatgcg
cctcgggtgctgctcgcgctgtgcaggcaacatgcggtcagtgccgtgcacctgaacgag
gaatacggggtacacgaacaacgtcgcgatcaggccgtgcagcaggcattgcgccaggcc
gacatccaggtgcacagctacctggaccagttgctgttcaagcccggcagcatcctgacc
cgcagcggcggttacttccaggtgttcagccagtttcgcaaggtgtgctacgaacggctt
cacctggggcttccctcacgggtagcggcgccggcagcccaggcccggctggccattgcc
agcgacaccgtccccacccaggtggccggcttcgagacgccgcccgacgcgttgcgcacg
ctgtggccggcaggcgaggatgaagccgcgcgccgcctggcgcgctttgtcgacgaggcc
atcgaggattatccggtacagcgcgaccttcctgccgtgcctggcaccagccagctgtcg
gcctacctcgccgccggggtgatctccccccgccagtgcctgcatgccgccctggcctgc
aacttcggcgaattcgacagcgggaatgccggcgccatcacctggatcaatgaactgctg
tggcgcgagttctacaagcacatcctggtgggctacccgcaggtttcccgccaccgtgcc
ttcaagtcacataccgaagccctgccctggcgcaacgcgccacaggacctgctggcctgg
caacagggccgcaccggcatccctatcgtggatgcggccatgcgccagttgctcgccaca
ggctggatgcacaatcgcctgcgcatggtcacggccatgtttctgaccaagaacctgctg
atcgactggcgtgaaggcgaacgcttcttcatgcgccacctgatcgacggcgacctggcc
gccaacaacggcggctggcagtggagcgcctcgaccggtaccgacgccgtgccctacttt
cggatcttcaatccggtgagccagtcacaacgcttcgaccctgcagggcgatttctgaag
cactggctgcctgaacgcggcaacctggaccacaaggccgtccatttacccaatgtccag
aacgatttgtttgcaatagatgtctatcctcatgcaattgtagacttaagttctagtcga
caacgcgcactggatgcgttcaaacacttacctaaacgcaacgattga
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