KEGG   Pseudomonas qingdaonensis: KH389_06075
Entry
KH389_06075       CDS       T07622                                 
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
  KO
K06176  tRNA pseudouridine13 synthase [EC:5.4.99.27]
Organism
pqi  Pseudomonas qingdaonensis
Brite
KEGG Orthology (KO) [BR:pqi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:pqi03016]
    KH389_06075 (truD)
Enzymes [BR:pqi01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.27  tRNA pseudouridine13 synthase
     KH389_06075 (truD)
Transfer RNA biogenesis [BR:pqi03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    KH389_06075 (truD)
 Prokaryotic type
    KH389_06075 (truD)
SSDB
Motif
Pfam: TruD E3_binding
Other DBs
NCBI-ProteinID: QVL20158
LinkDB
Position
1352750..1353808
AA seq 352 aa
MTELELLGPQAAGPALGSAILKATAEDFQVDEVLDIPLSGEGEHLWLWVEKRDLNTEEAA
RRLARAAGVPLRTVSYAGLKDRQALTRQWFSLHLPGKADPDLSAAENETLSILRHTRHSR
KLQRGAHSANGFTLRLTALSADHQALDARLEQLRIQGVPNYFGSQRFGFAGGNVHDARQW
AERKALPEQRNVRSRLLSSARSYLFNRVLAERVADGSWQQAQVGDLLAFTDSRSFFAAGE
AECSDPRLAILDLHPTGPLWGEGLPATSGAGGAIEQHVAEQEAALCQWLGNANLKQERRI
LRLPIGGLTWHYPEPDILQLEFVLPAGCFATVVVRELVDLVPAGQTDSPCVF
NT seq 1059 nt   +upstreamnt  +downstreamnt
atgaccgaactcgaactgctcggcccgcaggcagccgggccggcgctgggcagcgccatc
ctcaaggccacggccgaagatttccaggtcgatgaagtgctcgacattcccctgtcgggt
gaaggcgagcacttgtggctgtgggtcgagaaacgcgacctcaataccgaggaggccgcc
cgccgcctggcccgcgccgccggcgtaccgctgcgcaccgtgagctatgccggcctcaag
gaccgtcaggcgctgactcgccaatggttcagcctgcacctgccgggcaaggccgaccct
gacctgagcgcggctgaaaacgaaaccctgagcatcctcagacacacccgccactcgcgc
aaactccagcgtggcgcgcactcggccaacggcttcaccctgcgcctcacagcgctcagc
gccgatcaccaggccctggacgcgcgcctcgagcaattgcgcatacaaggcgtgcccaac
tacttcggcagccagcgatttggctttgcgggcggcaacgtgcacgatgcgcgccagtgg
gccgagcgcaaggccctgcccgagcagcgcaatgtgcgctcgcggctgctgtccagcgca
cgcagctacctgttcaaccgggtgctggccgagcgggttgccgatggcagctggcaacag
gctcaggtcggcgacctgctggcgttcaccgacagccgcagctttttcgcggcgggcgag
gccgagtgcagcgatccgcgcctggcaatactcgacctgcaccctaccgggccgctgtgg
ggcgagggcctgccggccaccagtggggcaggcggtgcgatcgagcaacacgtggccgaa
caggaggcagccctgtgccaatggctgggcaatgccaacctcaaacaggaacggcgcatt
ctgcggctgcccattggcggcttgacgtggcattatcccgagcctgatatcctgcaactg
gaattcgtccttccggccggatgcttcgccaccgtggtggtgcgcgaactcgtcgatctg
gtgccggcagggcagacggacagcccatgcgtattctga

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