Pseudomonas qingdaonensis: KH389_06095
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Entry
KH389_06095 CDS
T07622
Symbol
rpoS
Name
(GenBank) RNA polymerase sigma factor RpoS
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
pqi
Pseudomonas qingdaonensis
Brite
KEGG Orthology (KO) [BR:
pqi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pqi03021
]
KH389_06095 (rpoS)
Transcription machinery [BR:
pqi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
KH389_06095 (rpoS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
QVL20162
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All DBs
Position
1356366..1357373
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AA seq
335 aa
AA seq
DB search
MALSKEVPEFDIDDEVLLMETGIVLETDVVSDEPAVSPVRTRAKQGSPLKQHKYIDYTRA
LDATQLYLNEIGFSPLLSPEEEVHFARLSQSGDPAGRKRMIESNLRLVVKIARRYVNRGL
SLLDLIEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTRTIRLPIHVVKE
LNVYLRAARELTQKLDHEPSPEEIANLLEKPVGEVKRMLGLNERVSSVDVSLGPDSDKTL
LDTLTDDRPTDPCELLQDDDLSQSIDLWLSELTDKQREVVIRRFGLRGHESSTLEDVGLE
IGLTRERVRQIQVEGLKRLREILEKNGLSSESLFQ
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atggctctcagtaaagaagtgccggagtttgacatcgacgatgaggtgctccttatggaa
accggcatcgttttggaaacggatgtggtgtcagacgaacctgctgtatctccggttcgg
acccgggccaaacaaggctcaccgctcaaacagcacaagtacatcgattacactcgagca
cttgatgcaactcagctctacctcaacgaaatcggcttttcgcccctgctttccccggaa
gaagaagttcattttgcgcgtttgtcgcaaagtggcgaccctgccgggcgcaaacgcatg
atcgaaagcaacctgcgcctggtggtgaagattgcgcgccgctacgtcaaccgcggtcta
tcgctgctcgacctgatcgaagagggcaacctgggcctgattcgcgcagtcgagaagttc
gaccccgagcgtgggttccgtttctcgacctacgccacctggtggatccggcagaccatc
gaacgcgccatcatgaaccagacgcgcaccattcgcctgccgatccatgtggtcaaggaa
ctgaacgtctacctgcgtgcagcacgcgagctgacccagaaactcgatcacgagccctca
ccggaagagatcgccaacctgctggaaaaacccgtaggcgaggtcaagcgcatgctcggc
ctgaacgagcgcgtgtcttcggtggacgtttcactgggcccggactcggacaagaccctg
ctcgataccctcaccgacgatcgtcccaccgacccctgcgagctgttgcaggacgacgac
ctgtcccagagcatcgacctgtggctgagcgaactgaccgacaagcagcgtgaggtggtg
attcgccgctttggcctgcgcgggcatgagagcagcaccctggaggatgttggcctggag
attggtcttacccgggagcgggtacgtcagatccaggtggagggcctcaagcggctgcgg
gagatcctggagaagaacggtctgtccagcgagtcgctgttccagtaa
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