Pseudomonas qingdaonensis: KH389_07265
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Entry
KH389_07265 CDS
T07622
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pqi
Pseudomonas qingdaonensis
Brite
KEGG Orthology (KO) [BR:
pqi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pqi03032
]
KH389_07265
03400 DNA repair and recombination proteins [BR:
pqi03400
]
KH389_07265
Enzymes [BR:
pqi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
KH389_07265
DNA replication proteins [BR:
pqi03032
]
Prokaryotic type
DNA Topoisomerases
KH389_07265
DNA repair and recombination proteins [BR:
pqi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
KH389_07265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Toprim_4
Zn_ribbon_Top1
Zn_ribbon_recom
Motif
Other DBs
NCBI-ProteinID:
QVL20372
LinkDB
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Position
complement(1554682..1556592)
Genome browser
AA seq
636 aa
AA seq
DB search
MKLMIIEAPGKLKKLGPMMKKIRPGEHWVVVASGGHIRDLPQSGQDDTMITTGVLKTLRP
VYEILPKSARNVSSIRKALKDATEVYIATDPDREGESIAWHIQQALGIREYKRVTFNEIT
QARVREGLANARRIDGQLVASQECRRVLDRLVGYLVTQELRRVLGQPTSAGRVQSPALYL
VVLREREIRNFKVVHHFGVELTFKDETTGMDWTAVWQPIPDFASKENPYIQDGTLAARVA
ATRAVIVESCEDGKKRRPPPPPFISSTLQQAASVALKWDPDKTMQFAQRLYEQGVITYHR
TDNPNLADEAMPDIQAVARRQGLDVVDERRTFKAADSAQEGHPAIAPTAWEDEVAGESAE
EQALYKLIRIRALASQLADAIYDVRMAKLLARGPDQRPLRFAATGSTVAYLGWMKLLQKD
ETDEESTDIPKNPVPVLEPKQILSVLQGEVLNQKTKAPARFTKASLIKELERLGIGRPST
FASIIKNITGKGLVVEEKRKLVPGPLGVSTIEQLEGRFSFVELAFTSTLEKDLDRIARGE
EQYGSVVAKFFQHLQTELAALRQAPTVAMKARSPEASSGNQGGHSCGKCGMPLARRQKRG
DGGYDFWGCTGYKVNNCRVSYPSVSGKPDMSKPRGL
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atgaaactcatgatcatcgaggcaccgggcaagctgaagaagcttgggcccatgatgaag
aagatccgccctggcgagcactgggtggtggtggcatctggtggccacatccgtgatctc
ccccagtcgggtcaggacgacacgatgatcacaaccggcgtcttaaagacccttcgtccg
gtctacgagatcctgcccaaaagtgcccgcaacgtcagctccattcgcaaagcgctcaag
gacgccacggaggtgtatatcgccaccgacccggaccgggagggggaaagtatcgcctgg
cacatacagcaggcgctggggatccgcgagtacaagcgagtcacgttcaatgagatcacc
caagccagagtacgagagggcctggccaatgcacggagaatcgatgggcaactcgttgcc
tcacaagagtgccggcgagtgctggaccgcctggtgggctacctggtcacgcaggagctt
cgcagagtcctgggccaacctacctccgctggtcgagttcagtcacctgccctctacctg
gtggtgttgcgcgagcgagaaatcaggaacttcaaggtggtccaccacttcggggtagag
ctgaccttcaaggacgaaaccaccggtatggactggactgccgtatggcaaccgatcccc
gacttcgcgagcaaagaaaacccctacattcaggacggcacactcgcggcaagggttgcc
gcaacgcgcgcggttattgtcgagtcatgtgaagacggcaagaagcggcgcccgcccccc
ccaccgttcatttcatccaccctgcagcaggcggccagcgtagcgctgaaatgggacccg
gacaaaaccatgcagttcgcgcagcgcctgtacgagcagggcgtgatcacctatcaccgg
acggataaccccaacttggccgatgaagccatgccagatatccaggcagtggctcgcagg
caaggcctcgacgttgttgacgagcgccggacgttcaaggctgcggatagcgcccaggaa
ggtcaccccgcaattgcgccaaccgcgtgggaggatgaagtcgcaggcgagtctgctgaa
gagcaagcgctgtacaagctcatccggatcagggcgctggccagccagctcgcagacgcc
atctacgacgtgcgcatggccaaactgctggccagggggccggatcagaggcctctgcgc
ttcgccgcgactggcagcactgtcgcctatctcggatggatgaagcttttgcagaaggac
gagacggatgaagagtcgaccgacatccccaagaatccggtgccggtgctcgaacccaaa
cagatcctcagcgtgcttcagggtgaggtgctcaaccagaagacgaaggcgccggcacgc
ttcaccaaggcaagcctgatcaaggagctggagcgactggggatcggacgccccagcacg
tttgcatcgatcatcaagaacatcaccggcaaaggcctggtcgttgaggagaagcgcaaa
ttggtcccaggcccgttgggggtgagcaccatcgagcagttggagggccgcttcagcttc
gtcgaactggcgttcaccagcacgctggagaaggacctggaccgaatcgcacgcggagag
gagcagtacggctcggtggtcgccaagttctttcagcatctccagacggagctcgcagcc
ctccgccaggcgcccacagtggcgatgaaggcgcgttcgcctgaagcttcatcaggcaac
cagggcggccattcctgcggcaagtgcgggatgccactggcgcgccgccagaagcgcggt
gatgggggttacgacttctggggatgcaccgggtacaaggtgaacaactgccgtgtgagc
tacccctcggtgagcggcaagccggatatgtccaagcccaggggcttgtag
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