Pseudomonas qingdaonensis: KH389_07715
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Entry
KH389_07715 CDS
T07622
Symbol
fadD1
Name
(GenBank) long-chain-fatty-acid--CoA ligase FadD1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pqi
Pseudomonas qingdaonensis
Pathway
pqi00061
Fatty acid biosynthesis
pqi00071
Fatty acid degradation
pqi01100
Metabolic pathways
pqi01212
Fatty acid metabolism
pqi02024
Quorum sensing
pqi04146
Peroxisome
Module
pqi_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pqi00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
KH389_07715 (fadD1)
00071 Fatty acid degradation
KH389_07715 (fadD1)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
KH389_07715 (fadD1)
09145 Cellular community - prokaryotes
02024 Quorum sensing
KH389_07715 (fadD1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pqi01004
]
KH389_07715 (fadD1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pqi04147
]
KH389_07715 (fadD1)
Enzymes [BR:
pqi01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
KH389_07715 (fadD1)
Lipid biosynthesis proteins [BR:
pqi01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
KH389_07715 (fadD1)
Exosome [BR:
pqi04147
]
Exosomal proteins
Exosomal proteins of breast milk
KH389_07715 (fadD1)
Exosomal proteins of breast cancer cells
KH389_07715 (fadD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
QVL20458
LinkDB
All DBs
Position
1637405..1639102
Genome browser
AA seq
565 aa
AA seq
DB search
MIEHFWKDKYPAGVASQINPDEYPNIQAVLKQSCQRFADKPAFSNLGKTLTYGELYELSG
AFAAYLQQHTDLQPGDRIAVQLPNVLQYPVAVFGAMRAGLIVVNTNPLYTARELEHQFND
SGAKALVCLANMAHLAEKVVPKTQVKHIIVTEVADLLPPLKRLLINSVIKYVKKMVPAYH
LPKAVKFNDALAKGQGKAVNEVSPDSGDVAVLQYTGGTTGVAKGAMLTHRNLVANMLQCR
ALMGSNLGEGCEVLITPLPLYHIYAFTFHCMAMMLIGSHNILISNPRDLPAMVKELSKWK
FTGFVGLNTLFVALCNNETFRKMDFSGLKLTLSGGMALQVAVAERWKSVTGCSICEGYGM
TETSPVAAVNPAEHNQIGTIGIPLPSTLCKVIDDNGKELALGEIGELCIKGPQVMKGYWQ
REEATTEILDADGWLKTGDIAVIQTDGYMRIVDRKKDMILVSGFNVYPNELEDVLATLPG
VLQCAAIGVPDEKSGELIKIFIVARPGVTLTKDQVMEHMRANVTAYKVPRLIEFRDALPT
TNVGKILRRELRDEELKKLGLKKIA
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaacacttttggaaggataagtacccagccggggttgcctcgcaaatcaatcct
gatgagtatccgaacattcaagcggtattgaagcagtcctgccagcgtttcgccgacaag
ccggcgttcagcaacctgggcaagaccctcacctatggcgagctgtatgagctgtcgggg
gcgtttgccgcctacctgcagcagcataccgacctgcagcccggtgaccgcatcgcggta
caactgccaaacgtattgcaataccccgtggccgtcttcggtgcgatgcgcgccgggctc
atcgtggtcaacaccaacccgctgtacaccgcgcgggagctggaacaccagttcaacgat
tccggtgccaaggcgctggtgtgcctggccaacatggcccacctggccgaaaaggtcgtt
cccaagacccaggtcaagcacatcattgtcaccgaagtggccgacctgctgccaccgctc
aagcgtctgctgatcaatagtgtgatcaagtacgtgaaaaagatggtgccggcctatcac
ctgcccaaggccgtcaagttcaacgatgcgctggccaaggggcagggcaaggcggtcaac
gaagtcagccccgacagcggagatgtcgccgtgctgcagtacaccggtggcaccacgggt
gtggccaagggtgcgatgctgacccaccgcaacctggtggccaacatgctgcaatgccgt
gcgctgatgggctcgaacctgggcgagggctgcgaggtcctgatcacgccgctgccgctg
taccacatctatgccttcaccttccattgcatggcgatgatgctgatcggcagccacaac
atcctgatcagcaacccgcgcgacctgccggcgatggtcaaggaactgtccaagtggaag
ttcaccggcttcgtcggcctgaataccctgttcgtggccctgtgcaacaacgagaccttc
cgcaagatggacttctcggggctcaagctcaccctgtcgggcggcatggccctgcaggtg
gcggtggccgagcgctggaagagcgtcaccggttgctccatctgcgaaggctacggcatg
accgagaccagcccggtggcggcggtcaacccggccgagcacaaccagatcggtaccatc
ggcattccgctgccgtcgaccctgtgcaaggtgatcgacgacaatggcaaggagctggcg
ctgggcgagatcggcgagctgtgcatcaagggcccgcaggtgatgaagggctactggcag
cgcgaagaggcgaccaccgagatcctggatgccgacggctggctcaagaccggtgatatc
gcggtgatccagaccgatggctacatgcgcattgtcgaccgcaagaaggacatgattctg
gtgtctggcttcaacgtttacccgaacgaactcgaagacgtgctggcgaccctgccgggc
gtattgcagtgcgccgccattggcgtgccggacgagaaatcgggcgaactgatcaagatc
ttcatcgtggcgcggccgggtgtgaccctgaccaaggaccaggtgatggagcacatgcgc
gccaatgtcacggcgtacaaggtgccgcgcctgatcgagttccgcgatgccttgccgacc
accaacgtgggcaagatcctgcggcgcgagttgcgcgatgaagagttgaagaagctgggc
ctcaagaagatcgcctga
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