Pseudomonas qingdaonensis: KH389_08400
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Entry
KH389_08400 CDS
T07622
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K10943
two-component system, response regulator FlrC
Organism
pqi
Pseudomonas qingdaonensis
Pathway
pqi02020
Two-component system
pqi02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pqi00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
KH389_08400
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
KH389_08400
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
pqi02022
]
KH389_08400
02035 Bacterial motility proteins [BR:
pqi02035
]
KH389_08400
Two-component system [BR:
pqi02022
]
Other families
FlrB-FlrC (polar flagellar synthesis)
KH389_08400
Bacterial motility proteins [BR:
pqi02035
]
Flagellar system
Flagellar assembly proteins
Others
KH389_08400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_16
AAA_5
HTH_20
FleQ
AAA_2
HTH_30
AAA_3
MerR
AAA
MCM
Mg_chelatase
AAA_19
HTH_28
nSTAND3
HTH_23
HTH_24
TIP49
HTH_11
ATPase
DUF2249
Sigma70_r4_2
AAA_22
HTH_17
HTH_1
OKR_DC_1_N
Xre-like-HTH
AAA_7
Myosin_head
Motif
Other DBs
NCBI-ProteinID:
QVL20578
LinkDB
All DBs
Position
1796159..1797544
Genome browser
AA seq
461 aa
AA seq
DB search
MRAIKVLLVEDDRVLRQALADTLELGGFAYHAVGSAEEALEVAASQPFSLVVSDVNMPGM
DGHQLLAALRARQPQLPVLLMTAHAAVERAVDAMRQGAADYLVKPFEPRALLDLVARHAL
GVASGADADGPVAREPASAQLLELAARVARSDSTVLISGESGTGKEVLARYIHQQSLRAD
QPFVAINCAAIPDNMLEATLFGHEKGSFTGAIAAQPGKFEQADGGTLLLDEISEMPLGLQ
AKLLRVLQEREVERVGGRKPIALDIRVVATTNRDLAGEVAAGRFREDLFYRLSVFPLAWR
PLRERSADILPLAERLLARHVNKMKHAPVRLSAQAQACLQGYPWPGNVRELDNAIQRALI
LQQGGVIEAADFCLAGVLPLLAASPVEPVLVLAEPSEPAGLGDDLRRHEFQMIIDTLRAE
RGRRKEAAERLGISPRTLRYKLAQMRDAGLDVEASLYASGV
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgagggcgatcaaggttctgctggtcgaggatgaccgcgtactgcgccaggccctggcc
gataccctggagttgggcggttttgcctatcatgcagtgggctcggccgaagaagcgctg
gaagtggcggccagccagcccttcagcctggtggtcagcgacgtcaacatgccgggcatg
gacggtcaccagttgctggctgcgttgcgggcccgccagccgcagttgccggtgctgctg
atgaccgcgcacgccgccgttgagcgtgcagtggatgcaatgcgccagggcgctgcggac
tatctggtcaagcccttcgagccgcgcgctttgctcgacctggtggcccgtcatgccctg
ggcgttgccagcggcgcggacgccgacggtccggtggcgcgcgagcctgccagtgcgcag
ttgctcgaactggccgcgcgggtggcgcgcagtgattccaccgtgctgatttccggcgaa
tcgggcaccggcaaggaggtgctggcgcgctacattcaccagcagtccctgcgtgccgac
cagccattcgtggccatcaactgcgccgccatccccgacaacatgctcgaagccacgttg
ttcggtcatgaaaagggctcgttcaccggggcgatagccgcccagccaggcaagttcgag
caggccgacggtggcacgctgctgctcgacgagatttccgaaatgccgctggggctgcag
gccaagctgctgcgggtgctgcaggagcgcgaggtcgagcgggtaggcgggcgcaagccg
atcgcgctggacatccgcgtggtcgccaccaccaaccgcgaccttgccggcgaagtggcg
gcggggcggtttcgcgaagacctgttctatcgcctgtcggtgttcccgctggcctggcga
ccgctgcgcgagcgcagcgccgacattctgccgctggccgagcgtctgctggcgcgacac
gtcaataaaatgaagcatgcccccgtgcgcctgtcggcccaggcccaggcctgcctgcaa
ggctatccgtggccgggtaacgtgcgcgagctggacaacgccatccagcgggcgctgatc
ctgcagcagggcggggtgatcgaggcggcggacttctgcctggccggggtgctgccgctg
ctggcggcatcgcccgtagagccggtgctggtgctggccgagccgtccgagccagccggg
ctgggggatgatctgcgccgccacgagttccagatgatcatcgataccctgcgcgccgag
cgcgggcgccgcaaggaggctgccgagcgtctgggcatcagcccgcgcaccttgcgctac
aagctggcacagatgcgtgatgccggcctggatgtggaggcgagtctctacgccagcggc
gtgtga
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