Pseudomonas qingdaonensis: KH389_14280
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Entry
KH389_14280 CDS
T07622
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pqi
Pseudomonas qingdaonensis
Pathway
pqi02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pqi00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
KH389_14280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pqi03021
]
KH389_14280
Transcription machinery [BR:
pqi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
KH389_14280
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
PhyR_sigma-like
Sigma70_ECF
HTH_23
HTH_24
HTH_11
GerE
HTH_40
HTH_36
HTH_IclR
PCI
TnsD
HTH_PLP
Motif
Other DBs
NCBI-ProteinID:
QVL16601
UniProt:
A0ABX8DJX8
LinkDB
All DBs
Position
3141303..3141833
Genome browser
AA seq
176 aa
AA seq
DB search
MLRFSVSSPSTSPTPHADVRALYINHHAWLLGWLRKRMRHGDHAADLAHDIFVHILGKPE
QLQQLRQPRAWLSTVAHGLLVERVRRQRVERAYLEAIAHLPEAEVPSPESQLILLETLAR
VDALLNGLPPKVRMAFLLSRLEGLSYKEIAERLAVSLSSVEKYMASAIRHCYLAQR
NT seq
531 nt
NT seq
+upstream
nt +downstream
nt
atgctgaggttttccgtgtcgtcgccatccacttcccccacccctcacgccgatgttcgt
gcgctgtacatcaaccatcacgcctggttgctgggctggttgcgcaagcgcatgcgccac
ggcgaccacgcggcggacctggcccatgacatcttcgtgcacatcctcggcaagccggag
cagctgcagcagttgcgtcagccgcgtgcctggttgagcaccgtggcccacgggctgctg
gtggaacgcgtgcgtcgccagcgggtcgagcgggcgtatctggaggccatcgcacacctg
cccgaagccgaggtgccgtcgcccgagtcgcagctgatactgctggaaaccctggcccgt
gtggacgccctgctcaacggcctgccgcccaaggtgcgcatggcctttctgctgtcgcgc
ctggagggcctgagctacaaggagatcgccgagcgcctggcggtaagcctgagttcggtg
gagaagtacatggccagcgccattcgccattgctacctggcccagcgatga
DBGET
integrated database retrieval system
