KEGG   Pseudomonas qingdaonensis: KH389_17705
Entry
KH389_17705       CDS       T07622                                 
Symbol
traD
Name
(GenBank) type IV conjugative transfer system coupling protein TraD
  KO
K12071  conjugal transfer pilus assembly protein TraD
Organism
pqi  Pseudomonas qingdaonensis
Brite
KEGG Orthology (KO) [BR:pqi00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pqi02044]
    KH389_17705 (traD)
Secretion system [BR:pqi02044]
 Type IV secretion system
  Conjugal transfer pilus assembly protein
   KH389_17705 (traD)
SSDB
Motif
Pfam: TraG-D_C TrwB_AAD_bind DUF87
Other DBs
NCBI-ProteinID: QVL17234
UniProt: A0ABX8DME4
LinkDB
Position
3907343..3909502
AA seq 719 aa
MAEHAMESKLRPAVELYTVAICFAAAVLCLYSPWAVALTPEIGLVAALAYALFGFIRLRQ
AWDVLHYRRNIRRLPRYELTSRQIPVSRQRLFMGRGFRWTRLHTQRLVEAQDPAVAHYVD
PPTRYRLARGTERRLEQAPFPLSILARITAWDSAYNPLRPLPPVGGSPLLHGVEPDEMEV
SLPLGERVGHTLVLGTTRVGKTRLAEVYITQDIHRIQPEVVIVFDPKGDADLLKRMYVEA
RRAGRDKEFYVFHLGWPEISARYNAVGRFGRISEVASRIAGQLSGEGNSAAFREFAWRFV
NIIARALIELGRRPDYLQIQRHVVNIDALFIEYAQQFFAKTDPKAWEVIVQLEGKLNEKN
IPRHMVGREKRVVAIEQYLAVKRVFDPVLDGLRSAVRYDRTYFDKIVASLLPLLEKLTTG
KTAQLLAPNYTDLEDPRPIFDWMQIIRKRGIVYVGLDALTDAEVAAAVGNSMFADLVSVA
GHIYKHGIDHGLPSAGSSADKLPINLHADEFNELMGDEFIPLINKGGGAGIQVTAYTQTL
SDIEARIGNRAKAGQVIGNFNTLQMLRVRETATAELLTQQLPKINVLTKTLVSGATDTSD
PEANTDFTSSSQDRVSSTSVPLIEPAHIVSLPKGQMFSFQVGGQLWKVRMPLPKPSPDDA
MPKNLQELAKRMRSSYNEQAGHWWSASGGGPTLDFDPDRVTPPRPSVAVDTSGPTQEVP
NT seq 2160 nt   +upstreamnt  +downstreamnt
atggccgaacatgcgatggagtccaagcttcggccggcggtggagctgtacaccgtagca
atctgctttgcggcggcggtactgtgcctgtactcgccctgggccgtggcgctgaccccc
gaaatcggcctggtcgcggcgctggcctatgccttgttcggttttattcggctgcgccaa
gcctgggacgtgctgcactatcggcgcaatatccggcgcttgccccgctacgaactgacc
agtcgacagattccggtcagccgccagcgcttgttcatgggtcgcggctttcgctggact
cgcctgcacacccaacgcttggttgaggcccaggacccggccgtggcccattatgtcgat
ccgccgacccgctaccgcctggcccgcgggactgagcggcgtctggagcaggcgccgttt
ccgctctcgatactggcgcggattaccgcgtgggacagcgcctacaacccgttgcgtccg
ttgccccccgtaggcggttcaccactattgcatggggttgagccggatgagatggaagtc
agtttgccgctgggcgaacgggtcgggcataccttggtgctgggcactactcgcgtggga
aagacacgtctggccgaggtgtacatcacccaggacatccaccgtatccaacctgaggtg
gtgatcgtcttcgaccccaagggcgatgctgacctgctcaaacgcatgtacgtcgaagcc
cgccgcgccggtcgggacaaggagttctatgtgttccatctgggttggccagagatctca
gcccgctacaacgccgtaggacggttcgggcggatctcggaggtggcctcacgcatcgcc
ggtcagctcagcggcgaaggtaactctgccgcctttcgcgagtttgcctggcgtttcgtc
aatatcatcgcccgggccctgatcgagcttggccggcgcccggactacctacagatccaa
cggcatgtggtcaatatcgacgcgctgtttatcgaatacgcccagcaatttttcgccaag
actgacccgaaagcctgggaagtgatcgtccaactcgaaggcaagctcaacgagaagaac
attccgcggcatatggtcggccgcgaaaagcgcgtggtggccatcgaacaatacctggca
gtgaaacgggtctttgatccggtgctggacgggctgcgttcggcagtgcgctatgaccgc
acctacttcgacaaaatcgtcgcctcgctgctgccgctgctggaaaaactcaccaccggc
aagaccgcgcagttgctggcccccaattacactgatctggaggatccacggccaatcttc
gactggatgcagatcatccgcaaacgcggcatcgtctatgtcggtctggatgcgctgacc
gacgcggaagtggctgccgccgtaggcaactccatgttcgccgatctggtctcggtggct
gggcacatctacaaacatggcatcgaccatggcttgccttccgcaggcagcagcgccgac
aagctaccgattaacctgcatgccgatgagttcaacgagttgatgggtgatgagttcatt
ccgctgatcaacaagggcggcggagcgggcatccaggtgacggcgtacacccagaccctc
agcgatatcgaggcgcgcatcggcaaccgggcgaaagccggccaggtcatcggtaatttc
aacaccctgcagatgctccgagtgcgcgaaaccgccactgcggagctgctcacccaacag
ttgcctaagatcaacgtactgacgaaaaccttggtctcgggtgccacagacacctccgac
cccgaggccaacacggacttcacctcgtcctcccaagaccgggtcagcagcaccagcgtg
cccctgatcgagccggctcacatcgtcagtttgcccaaagggcagatgttctccttccag
gtgggagggcagctctggaaagtccgcatgccactgcccaagccttcgccggacgatgcg
atgcccaagaatctgcaggagctggctaagcggatgcgctccagctacaacgagcaggcg
ggacactggtggagtgcgagcgggggcggtcccacgctcgacttcgatccggaccgagtc
acgccaccccgcccctctgtagcggtggacacgagtgggcctactcaggaggtcccatga

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