Pseudomonas qingdaonensis: KH389_18890
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Entry
KH389_18890 CDS
T07622
Name
(GenBank) exonuclease SbcCD subunit D C-terminal domain-containing protein
KO
K03547
DNA repair protein SbcD/Mre11
Organism
pqi
Pseudomonas qingdaonensis
Brite
KEGG Orthology (KO) [BR:
pqi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pqi03400
]
KH389_18890
DNA repair and recombination proteins [BR:
pqi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
KH389_18890
Archaeal homologous recombinant proteins
KH389_18890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Flavi_M
Motif
Other DBs
NCBI-ProteinID:
QVL17455
LinkDB
All DBs
Position
4164655..4165896
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AA seq
413 aa
AA seq
DB search
MRLFHTSDWHLGQTLHGQERDFEHACFLDWLLGQLKLRQPDALLIAGDIFDTVNPPVKAQ
ERLYDFIVQAHEQQPRLNIVMIAGNHDSGSRIELPAPLMRRLRTYALGRVHWLDDGQLDS
ERLLVPLTNAKGKVTAWCLALPFLRPAEVTGAHLGDDYLRGIGQVHEWLIEAALKQRKPG
QALIAVSHAHMAGGSVSEDSERSLIIGNAEALPASLFGSQISYVALGHLHKPQKVNREDR
IRYSGSPIPLSFSEIGYQHQILEVELDGATLTSVEPRLIPRAVPLQRLGPAPLVEILEQL
GQLPQVDLLDDPQRQPWLEVRVRLDEPQPDLRQQLEACLQGKAVRLVRIAAEYAGTGASD
GEDDTRLIELGQLSPHDLFSRAWEQAYGTSVDEQTLADFALLLQDVQQEEEQP
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctgtttcacacctccgactggcacctggggcaaaccctgcatggccaggagcgc
gacttcgaacatgcctgctttctcgactggctgctcggccagctcaagctgcgccagcct
gacgcgctgctgattgccggcgacatcttcgacaccgtcaacccgccggtcaaagcccag
gagcgcctctacgacttcatcgtccaggcccacgaacagcagcccaggctgaacatcgtg
atgatcgccggcaaccacgactccggctcgcgcatcgaattgcccgcaccgctgatgcgc
cgtctcaggacctacgccctgggtcgcgtgcactggctcgacgacggccagctcgacagc
gagcgcctgctggtgccgctgaccaacgccaagggcaaggtgaccgcctggtgcctggcc
ctgcccttcctgcgcccggccgaagtcaccggcgcgcacctgggtgacgactacctgcgc
ggcatcggccaggtgcacgaatggctgatcgaggccgccctcaagcaacgcaagcctggc
caggcgctgatcgccgtgagccacgcacacatggccggcggctcggtatcggaagactcc
gagcgcagcctgatcatcggcaatgccgaggccctgcccgccagcctgttcggcagccag
atcagctacgttgccctgggccacctgcacaagccgcagaaggtcaaccgcgaagaccgc
atccgctacagcggctcgccgattccgctgtcgttctccgaaatcggctatcagcaccag
atcctcgaagtcgaactcgacggcgccaccctgaccagtgtcgaaccacgcctgataccg
cgtgccgtgcccctgcaacgcctgggcccggcgccgctggtggagattctcgaacaactc
gggcaactgccccaggtcgacctgctcgacgacccgcagcgccagccctggctggaggtg
cgggtgcgcctggacgaaccgcagcccgacctgcgccagcagctcgaagcctgcctgcaa
ggcaaggccgtgcgcctggtacgcatcgccgccgaatacgccggcaccggcgccagcgac
ggcgaggatgacacccgcctgatcgagctgggccagctcagcccccacgacctgttcagc
cgtgcctgggaacaggcctacggcaccagcgtcgacgaacagaccctggccgacttcgcc
ctgctgttgcaggacgtgcagcaggaggaggaacagccatga
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