Pseudomonas qingdaonensis: KH389_19125
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Entry
KH389_19125 CDS
T07622
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
pqi
Pseudomonas qingdaonensis
Brite
KEGG Orthology (KO) [BR:
pqi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pqi03016
]
KH389_19125 (truA)
Enzymes [BR:
pqi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
KH389_19125 (truA)
Transfer RNA biogenesis [BR:
pqi03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
KH389_19125 (truA)
Prokaryotic type
KH389_19125 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
QVL21683
UniProt:
A0ABX8E0X2
LinkDB
All DBs
Position
complement(4218507..4219352)
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AA seq
281 aa
AA seq
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MAAEGFFRIALGVEYKGTRYRGWQRQASGVPSVQQTLEEALSKVADSPVSLQCAGRTDAG
VHASGQVVHFDTRAVRSMKAWTMGANINLPHDVSVSWARQMPAHFHARFKAIARRYRYVI
YNDQIRPAHLGDQVTWNHRPLDAGRMAEAAAYLVGTHDFSAYRAGQCQAKSPIKQIHHLR
VSRHGRMIVLDIRASAFLHHMVRNIAGVLMTIGAGERPPEWAREVLESRVRRTGGVTAHP
FGLYLVQVEYHDEFELPERFIGPHFLTGYESLTADGPQGIC
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgaaggctttttcagaatcgcgctgggcgtggaatacaaaggcacccgctac
cgtggctggcaacgccaggccagtggcgtgccgagcgtgcagcagaccctcgaggaggca
ctgtcgaaggtcgccgactcgccagtgtcgctgcagtgcgccgggcgtaccgatgccggc
gtgcatgccagcggccaggtggtgcatttcgacacgcgggcggtgcgcagcatgaaggcc
tggaccatgggcgccaacatcaacctgccgcatgacgtcagcgtgtcgtgggccaggcag
atgccggcgcactttcacgcgcgcttcaaggccattgcccggcgctaccgctatgtgatc
tacaacgaccagatccgcccggcgcacctgggcgaccaggtcacctggaatcaccgcccg
ctcgatgccgggcgcatggccgaagccgcagcctacctggtgggcacccatgacttcagc
gcctaccgcgccggccagtgccaggccaagtcgccgatcaagcagatccatcacctgcgg
gtgagccggcatgggcgcatgatcgtgctggatatccgtgccagcgccttcctgcaccac
atggtgcgcaacattgccggcgtgctgatgaccatcggcgctggcgagcgtccgcccgag
tgggccagggaagtgctcgaaagccgcgtgcgtcgtaccggcggggtgaccgcgcacccg
ttcgggctgtacctggtgcaggtggaataccatgacgagttcgaactgcccgagcgtttc
atcgggccacatttccttacgggttacgagtcgttgacggctgacggcccgcaaggcatt
tgctaa
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