Pseudomonas qingdaonensis: KH389_19880
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Entry
KH389_19880 CDS
T07622
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
pqi
Pseudomonas qingdaonensis
Brite
KEGG Orthology (KO) [BR:
pqi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pqi03032
]
KH389_19880 (gyrA)
03400 DNA repair and recombination proteins [BR:
pqi03400
]
KH389_19880 (gyrA)
Enzymes [BR:
pqi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
KH389_19880 (gyrA)
DNA replication proteins [BR:
pqi03032
]
Prokaryotic type
DNA Topoisomerases
KH389_19880 (gyrA)
DNA repair and recombination proteins [BR:
pqi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
KH389_19880 (gyrA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
QVL17631
LinkDB
All DBs
Position
complement(4365941..4368580)
Genome browser
AA seq
879 aa
AA seq
DB search
MGELAKEILPVNIEDELRQSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMSELGNDWN
KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYLLVDGQGNFGSVDGDNAAAM
RYTEVRMTKLAHELLADLHKETVDWVPNYDGTEQIPAVMPTKIPNLLVNGSSGIAVGMAT
NIPPHNLGEVIDGCLALIDNADITVDELMQFIPGPDFPTAAIINGRQGIIEAYRTGRGRI
YMRARSTVEDIDKVGGRQQIVITELPYQLNKARLIEKIAELVKEKKLEGITELRDESDKD
GMRIVIELRRGEVPEVILNNLYAQTQLQAVFGINIVALIDGRPRVLNLKDLLEAFVRHRR
EVVTRRTVFELRKARERGHILEGQAVALSNIDPVIALIKASPTPSEAKEALIGTPWESSA
VQVMVERAGADSCRPETLDEQYGLRDGKYYLSPEQAQAILDLRLHRLTGLEHEKLLAEYQ
EILKQIGELIRILNNAERLMEVIREELELIRAEYGDVRRTEILDARLDLTLGDMIPEEDR
VVTISHGGYAKTQPLAAYQAQRRGGKGKSATGVKDEDYISHLLVANSHTTLLLFSSKGKV
YWLKTYEIPEASRAARGRPLVNLLPLGEGEVITTMLPVEEYTEGHFIFMATANGTVKKTP
LEQFSRQRSVGLIALELDEGDILISASITDGEREVMLFSDAGKVTRFKESDVRAMGRTAR
GVRGMRLAEGQKLISMIIPEEGSQILTASERGFGKRTAIAEFPEYKRGGQGVIAMVSNDR
NGRLVGAVQVQEGEEIMLISDQGTLVRTRVGEVSSLGRNTQGVTLIKLASDETLVGLERV
QEPSDEEDDEDFVADAEADVDAGEGSPLDAAADEETPQE
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atgggcgaactggccaaagaaatcctaccggtcaatatcgaagacgaactgagacagtcc
tacctcgactacgcgatgagcgtcattgtcgggcgtgcactgcccgatgcgcgtgatggc
ttgaagcccgtgcatcgccgcgttctgtttgcgatgagtgaactgggtaacgactggaac
aaaccgtacaagaaatccgcccgtgtggtcggtgacgtgatcggtaagtatcacccccac
ggtgataccgcggtctacgacaccatcgtccgtatggcccagccgttctcgctgcgctac
ctgctggtggacggccagggcaacttcggttcggtggacggcgacaatgccgcggccatg
cgatacaccgaagtgcgcatgaccaagctggcgcacgagctgctggcagacctgcacaag
gaaaccgtcgactgggtgcccaactacgacggcaccgagcagattccggcggtcatgccg
accaagatcccgaacctgctggtcaacggctccagcggtatcgccgtgggcatggcgacc
aacattccgccgcacaacctcggtgaagtcatcgacggttgcctggcgctgatcgacaac
gccgacatcacggtcgatgagctgatgcagttcatcccggggccggacttcccgactgcc
gcgatcatcaacggtcgccagggcatcatcgaggcctaccgtaccggtcgcgggcgcatc
tacatgcgtgcccgctcgacggtcgaggacatcgacaaggtcggtggccgccagcagatc
gtgatcaccgagctgccgtaccagctgaacaaggcgcggctgatcgagaagatcgccgag
ctggtcaaggaaaagaaactcgagggcatcaccgagctgcgcgacgagtccgacaaggac
ggcatgcgcatcgtcatcgagctgcgccgtggcgaagtgccggaggtgatcctcaacaac
ctctacgcccagacccagctgcaggccgtgttcggcatcaacatcgtggcgctgatcgac
ggccgtccgcgggtgctgaacctcaaggacctgctcgaggcgttcgtgcgtcaccgccgt
gaggtggtcacccgccgtaccgtgttcgagctgcgcaaggcccgtgaacgcggtcatatc
ctcgagggccaggcggtcgcactgtccaacatcgacccggtcatcgccctgatcaaggct
tcgccgacgccgtccgaggccaaggaagcgctgatcggcacgccgtgggagtccagcgcc
gtgcaggtgatggtcgagcgcgccggcgccgattcctgccgcccggaaaccctcgacgag
cagtacggtctgcgtgatggcaagtactacctttcgcccgaacaggcccaggccatcctg
gacctgcgcctgcaccgcctgaccggcctggagcacgagaagctgctggccgagtaccag
gagattctcaagcagatcggcgagctgattcgcatcctgaacaacgccgagcgcttgatg
gaagtgatccgcgaagagctggagctgatccgcgccgaatatggcgacgtgcgccgcacc
gagattctcgatgcacgcctggacctgaccctgggtgacatgatcccggaagaagaccgc
gtggtgactatctcccacggcggctacgccaagacccagccgctggcggcctaccaggcc
cagcgccgtggcggcaagggcaagtcggccaccggcgtcaaggacgaggactacatctcg
cacctgctggtcgccaacagccacaccacgctgctgctgttctccagcaagggcaaggtg
tactggctcaagacctacgaaatccccgaggcgtcgcgtgccgcacgtggccgtccgctg
gtgaacctgctgccgctgggcgagggcgaggtcatcaccaccatgctgccggtggaggaa
tacaccgaaggccacttcatcttcatggccaccgccaacggcaccgtgaagaagaccccg
ctggagcagttcagtcgtcagcgcagtgtcggcctgatcgcgctggagctggacgaaggc
gacatcctgatttccgcctccatcaccgatggtgagcgcgaggtcatgctgttctccgat
gccggcaaggtcacccgcttcaaggagtccgacgtgcgtgccatggggcgtaccgcccgc
ggtgtgcgcggcatgcgcctggccgaggggcagaagctgatttcgatgatcatccccgaa
gaaggcagccagatcctcacagcttccgagcgtggtttcggcaagcgtaccgccatcgcc
gagttccccgagtacaagcgtggtggccagggcgtcatcgccatggtcagcaacgatcgc
aacggccgtctggtcggtgcggtacaggtgcaggaaggcgaggagatcatgctgatttcc
gaccagggcaccctggtgcgtacccgtgtcggcgaagtctccagcctgggccgcaatacc
cagggcgtgacgctcatcaagctggccagcgacgagaccctggtgggtctggagcgagtg
caggagccgtccgacgaggaagacgacgaagacttcgtggcggatgccgaggctgacgtg
gacgccggcgaagggtcgccactggacgctgcagctgacgaagagacgccgcaggaataa
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