Pseudomonas qingdaonensis: KH389_21375
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Entry
KH389_21375 CDS
T07622
Name
(GenBank) 16S rRNA pseudouridine(516) synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
pqi
Pseudomonas qingdaonensis
Brite
KEGG Orthology (KO) [BR:
pqi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pqi03009
]
KH389_21375
Enzymes [BR:
pqi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
KH389_21375
Ribosome biogenesis [BR:
pqi03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
KH389_21375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
QVL17918
UniProt:
A0ABX8DQ22
LinkDB
All DBs
Position
4691221..4691913
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AA seq
230 aa
AA seq
DB search
MRLDRFLSNLPCFNRQQVRLLLVQRRVRVDGVAIADPHHEVREFSRVEVDQQVLQAGRAP
RYLMLHKPMGCVSATVDPQHRTVLDLLDEPDRNDLHIAGRLDFNTTGLLLLTNDGQWSRR
LTQPKTGLAKTYYVETEQPITDAYAPTFGQGIYFAFENLTTLPAELTLLGSHSARLSIVE
GRYHQVKRMFGFFDNKVTRLHRERMGPLHLDPQLAPGQYRALSQDEILAI
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctcgaccgttttctcagcaacttgccatgtttcaaccgccagcaggtgcgcctg
ctgctggtgcaacgacgggtgcgggtggatggcgtggccatcgccgacccgcaccatgag
gtacgcgagttcagccgcgtcgaggtcgaccagcaggtgctgcaagccgggcgtgcaccg
cgctacctgatgctgcacaagccgatgggttgcgtcagcgccaccgtcgacccgcagcac
cgcaccgtgctcgacctgctcgacgaacccgaccggaacgacctgcacatcgccgggcgc
ctggacttcaacaccaccgggttgctgctgctgaccaacgatggccagtggtcacgtcgc
ctgacccagcccaagacagggctggcgaaaacctactacgtcgagaccgagcagccgatc
accgacgcctatgcgccaacctttggccagggcatctacttcgccttcgaaaacctcacc
accctccccgccgagctcaccctgctgggcagccacagcgcgcgcctgagcatcgtcgag
gggcgctatcatcaggtcaaacgcatgttcggcttcttcgacaacaaggtcacgcgcctg
caccgcgagcgcatgggcccgctgcacctggacccgcagctggccccggggcaataccgt
gcgctgagccaggatgaaatcctggccatctga
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