Pseudomonas qingdaonensis: KH389_22825
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Entry
KH389_22825 CDS
T07622
Symbol
rluD
Name
(GenBank) 23S rRNA pseudouridine(1911/1915/1917) synthase RluD
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
pqi
Pseudomonas qingdaonensis
Brite
KEGG Orthology (KO) [BR:
pqi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pqi03009
]
KH389_22825 (rluD)
Enzymes [BR:
pqi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
KH389_22825 (rluD)
Ribosome biogenesis [BR:
pqi03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
KH389_22825 (rluD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
QVL18191
LinkDB
All DBs
Position
complement(4995792..4996754)
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AA seq
320 aa
AA seq
DB search
MSEKIELRAEVPSELGGQRLDQVAAQLFAEHSRSRLSAWIKEGLLTVDGNVVRPRDIVHG
GALLALDAEQEAQGEWVAQDIELDIVYEDEHILVINKPAGLVVHPAAGHADGTLLNALLH
HVPDIINVPRAGIVHRLDKDTTGLMVVAKTIQAQTQLVAQLQSRSVSRIYECIVIGVVTA
GGKINAPIGRHGQQRQRMAVMEGGKQAVSHYRVLERFRSHTHVRVKLETGRTHQIRVHMA
HVNFPLVGDPVYGGRFRIPPAASVTMVDALKTFPRQALHARFLELDHPVTGERMGWESSL
PDDFVWLLSLLKQDREAFVG
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgtccgagaaaattgaacttcgcgcagaggtaccgtccgaattgggcgggcaacgcctc
gaccaagtcgccgcccaactgtttgccgagcactcgcgctcgcgcctttccgcctggatc
aaagaaggcctactgaccgtcgatggcaacgtcgtgcgtccgcgcgacatcgtccatggc
ggcgctctgctggcgcttgacgccgagcaggaagcccagggcgagtgggtggcgcaggac
atcgaactggacatcgtctacgaagacgagcacatcctggtcatcaacaagccggccggg
cttgtggtgcacccggctgccggtcatgccgacggcaccctgctcaatgccctgctgcac
cacgtgccggacatcatcaacgtgccgcgcgccggcatcgtgcaccgcctcgacaaggac
accaccggtctgatggtggtggccaagaccattcaggcgcagacccagctggtagcccag
ttgcaaagtcgcagcgtcagccgcatctatgaatgcatcgtgatcggcgtggttaccgcg
ggcggcaagatcaacgccccgatcggtcgtcacggccagcagcgccagcgcatggcggtg
atggagggcggcaagcaggccgtcagccactatcgcgtgctcgaacgcttccgctcgcac
acccacgtgcgcgtcaagctggaaaccgggcgtacccaccagatccgcgtgcacatggcc
cacgtcaacttcccgttggtcggcgacccggtgtacggcgggcgcttccgcatcccgccg
gcggccagcgtgaccatggtcgacgcgctcaagaccttcccgcgccaggccctgcacgca
cgcttcctggagctggatcacccggtgaccggtgagcgcatgggctgggagtcgtccctg
ccggacgacttcgtatggctgctgtcgctgctcaagcaggaccgcgaggccttcgtcgga
tga
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