Pseudomonas qingdaonensis: KH389_22985
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Entry
KH389_22985 CDS
T07622
Symbol
mrcB
Name
(GenBank) penicillin-binding protein 1B
KO
K05365
penicillin-binding protein 1B [EC:
2.4.99.28
3.4.16.4
]
Organism
pqi
Pseudomonas qingdaonensis
Pathway
pqi00550
Peptidoglycan biosynthesis
pqi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pqi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
KH389_22985 (mrcB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pqi01003
]
KH389_22985 (mrcB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pqi01011
]
KH389_22985 (mrcB)
Enzymes [BR:
pqi01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
KH389_22985 (mrcB)
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
KH389_22985 (mrcB)
Glycosyltransferases [BR:
pqi01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
KH389_22985 (mrcB)
Peptidoglycan biosynthesis and degradation proteins [BR:
pqi01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
KH389_22985 (mrcB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
UB2H
Transpeptidase
UvrB_inter
PBP1_TM
Motif
Other DBs
NCBI-ProteinID:
QVL18218
LinkDB
All DBs
Position
complement(5026883..5029204)
Genome browser
AA seq
773 aa
AA seq
DB search
MTRTRSSRTSKKRPSGRARAWLGWALKLSLVGLVVLAGFAVYLDAVVQEKFSGKRWTIPA
KVYARPLELFVGQKLSKNDFLIELDALGYRRESVANGPGAASVNGNTIDLNTRGFQFYEG
MEKAQGVRVRFSGDYVAGLSGTNGSKLDVVRLEPLLIGGIYPKNLEDRILIKLDQAPPYL
LETLVAVEDRDFYHHFGVSPKSIARAIWVNTSSGAMRQGGSTLTQQLVKNFYLTNERSLS
RKLNEAMMALLLEAHYSKRDILEAYLNEVFVGQDGQRAVHGFGLASQFFFSQPLSELKLH
QVALLVGMVKGPSYYNPRRSPERALTRRNLVLDLLAEQGVATPEAVEAAKKMPLGVTKRG
SLADSSFPGFLDLVKRQLRQDYRDEDLTEEGLRIFTSFDPILQMKSEAAMNETFKRLSGR
KGADEVEAAMVVTNPETGEVQALIGSRQAGFAGFNRAIDAVRPIGSLVKPAVYLTALEKP
SQFTLTSWVQDEPFSVKGADGQVWKPQNYDRRAHGTIFLYQGLANSYNLSTAKLGLEVGV
PNVLKTIGRLGVNVDWPAFPSMLLGAGGMSPVQVATMYQTLANGGFNTPMRGIRSVLTAE
GEPLKRYPFQIQQTFDPGSIYLVQNAMQRVMREGTGRSVYSVLPSSLNLAGKTGTSNDSR
DSWFAGFSQDLLAVVWLGRDDNGKTPFTGATGALQVWTSFMRKADPLPLDMPQPDNVVQA
WVDPHTGQGSDASCPGAVQMPYIRGSEPVAGAACGGEQAPAESVMDWVKGWMN
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atgactcgtacccgatcttcccgtacctctaaaaaacgcccttctggccgcgcgcgcgcc
tggttgggctgggccctcaagctcagcctggtcggccttgtggtgctggccggctttgcg
gtttatctcgatgccgtggtccaggagaaattctccggcaaacgctggaccatcccggcc
aaggtctacgcacgcccgctcgagctgttcgtcgggcagaagctgagcaagaacgacttc
ctgatcgagctcgatgccctgggctatcgccgcgaaagcgtggccaacggcccgggcgca
gcctcggtcaatggcaacaccatcgacctcaatacccgcggcttccagttctatgaaggc
atggaaaaagcccagggcgtgcgcgtacgcttctcgggcgactacgttgccggcctgagc
ggtaccaatggctcgaagctcgacgtggtgcgcctggagccgctgctgatcggcggcatc
tacccgaagaacctcgaagaccgcatcctgatcaagctcgatcaggcgccgccctatctg
ctcgaaaccctggtggcggtggaagaccgtgacttctatcaccacttcggggtgtcgccc
aagtcgattgcgcgggccatatgggtcaacacctcgtccggcgccatgcgccagggcggc
agtaccctgacccagcagttggtcaagaacttctacctgaccaacgagcgcagcctcagc
cgcaagctcaacgaagcgatgatggcgctgctgctcgaagctcactacagcaagcgcgac
atcctcgaggcgtacctcaacgaggtgttcgtgggccaggatggccagcgtgcggtgcac
ggtttcggcctggccagccagttcttcttcagccagccgctgtccgagctcaagctgcac
caggtggcgctgctggtgggcatggtcaaggggccgtcctactacaacccgcgtcgttcc
ccggaacgcgcgctgacgcgtcgcaacctggtgctcgacttgctggccgagcagggcgtg
gcgacccccgaagcggtcgaggccgcgaagaaaatgccactgggtgtgaccaagcgcggc
agcctggcggacagctcgttccccggcttcctcgatctggtcaagcgccagttgcgccag
gactaccgtgacgaagacttgaccgaggaggggctgcgtatcttcaccagcttcgacccg
atcctgcagatgaagtccgaagcggcgatgaacgaaaccttcaagcgcctcagcgggcgc
aagggggcggacgaagtcgaggcggcgatggtggtgaccaacccggaaaccggggaggtg
caggcactgatcggcagccgccaggccgggtttgccggtttcaaccgtgcaatcgacgcc
gtgcgtcccatcggctcgctggtcaagccggcggtgtacctgaccgcgctggaaaaaccg
agccagttcaccctcaccagctgggtgcaggatgaacccttctcggtgaagggcgccgac
ggccaggtgtggaagccgcagaactacgaccggcgcgcccatggcacgatcttcctgtac
caggggctggccaattcctacaacctgtcgaccgccaagcttggcctggaagtgggcgtg
cccaacgtgctcaagaccattggccgcctgggtgtcaacgtcgactggccggccttcccg
tcgatgctgctgggtgccgggggcatgtcgccggtgcaggttgcgaccatgtaccagacc
ctggccaatggcggcttcaacacgccgatgcgaggcatccgcagcgtgctgaccgccgag
ggcgagccgctcaagcgctacccgttccaaatccagcagacgttcgacccggggtccatc
tatctggtgcagaacgccatgcagcgggtgatgcgtgaaggtaccggacgctcggtttac
agtgtattgcccagttcgttgaacctggccggcaagaccggtaccagcaacgattcgcgt
gacagctggttcgcagggttcagccaggacctgctggcagtggtgtggctgggtcgcgat
gacaacggcaagacaccgttcaccggcgccaccggcgcgttgcaggtctggaccagcttc
atgcgcaaggccgacccgctgccgctggacatgccacagcctgacaacgtggtgcaggcc
tgggtcgatccgcataccggccaaggttccgatgccagctgcccgggcgcggtacagatg
ccgtatattcgcggcagtgagccagtggccggcgccgcctgtggcggcgagcaggcacct
gccgagtccgtgatggactgggtcaagggctggatgaattaa
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