Pseudomonas qingdaonensis: KH389_23120
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Entry
KH389_23120 CDS
T07622
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pqi
Pseudomonas qingdaonensis
Pathway
pqi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pqi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KH389_23120 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pqi03019
]
KH389_23120 (pnp)
03016 Transfer RNA biogenesis [BR:
pqi03016
]
KH389_23120 (pnp)
Enzymes [BR:
pqi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
KH389_23120 (pnp)
Messenger RNA biogenesis [BR:
pqi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
KH389_23120 (pnp)
Transfer RNA biogenesis [BR:
pqi03016
]
Prokaryotic type
tRNA degradation factors
KH389_23120 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
S1_RRP5
KH-I_KHDC4-BBP
KH_2
OB_RRP5_4th
S1_2
Motif
Other DBs
NCBI-ProteinID:
QVL18244
LinkDB
All DBs
Position
complement(5063699..5065804)
Genome browser
AA seq
701 aa
AA seq
DB search
MNPVIKKFQFGQSTVTLETGRIARQASGAVLVTVDNDVTVLVTVVGAKQADPGKGFFPLS
VHYQEKTYAAGKIPGGFFKREGRPSEKETLTSRLIDRPIRPLFPEGFMNEVQVVCTVVST
SKKTDPDIAAMIGTSAALAISGIPFEGPIGAARVAFHESTGYLLNPTYEQLAASSLDMVV
AGTSDAVLMVESEAKELTEDQMLGAVLFAHDEFQAVIQAVKELAAEAAKPTWDWTAKAEN
TPLLSAIRGEFGAAVSDAYTITVKADRYARLGELREQVIAKFSGEEGQPTAAEVKEIFGE
IEYRTVRENIVNGKPRIDGRDTKTVRPLNIEVGVLPKTHGSALFTRGETQALVVATLGTA
RDAQLLDTLEGERKDPFMLHYNFPPFSVGECGRMGGAGRREIGHGRLARRSVQAMLPAAD
VFPYTIRVVSEITESNGSSSMASVCGASLALMDAGVPMKAPVAGIAMGLVKEGEKFAILT
DILGDEDHLGDMDFKVAGTAKGVTALQMDIKINGITEEIMEIALGQALEARLNILGQMNQ
IIGQSRTELSENAPTMIAMKIDTDKIRDVIGKGGATIRAICEETKASIDIEDDGSIKIFG
ETKDAAEAARQRVLSITAEAEIGKIYVGKVERIVDFGAFVNILPGKDGLVHISMLSDARV
EKVTDILKEGQEVEVLVLDVDNRGRIKLSIKDVAAAKASGV
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
gtgaacccggtaatcaagaaattccagttcggtcaatcgaccgttaccctcgagacgggc
cgtattgctcgtcaagcgtccggcgccgtattggtcaccgtcgacaacgatgtcaccgtg
ctggtgaccgtggtcggtgccaaacaggccgatccaggcaaaggcttcttccccctgtcc
gttcactatcaggaaaagacctacgccgccggcaagatccctggtggtttcttcaagcgt
gaaggccgtccttccgagaaagagaccctgacctcgcgtctgatcgaccgtccgatccgt
ccgctgttccctgaaggcttcatgaacgaagtgcaggttgtctgcaccgtcgtttccacc
agcaagaaaaccgatccggacatcgctgccatgatcggtacctcggctgcgctggccatc
tccggcattccgttcgaaggccctatcggcgccgcccgtgtcgctttccacgaaagcacc
ggctacctgctgaacccgacctacgagcaactggctgcctcgagcctggacatggtcgtt
gccggtacctccgacgccgtgctgatggtcgaatcggaagccaaggagctgaccgaagac
cagatgctgggcgccgtgctgttcgcccacgatgaattccaggccgtgatccaggccgtc
aaggagctggctgccgaagccgccaagcctacctgggactggactgccaaggccgagaac
accccgctgctgagcgccattcgtggcgaattcggtgccgcggtgtccgatgcctacacc
atcaccgtcaaggccgaccgttatgctcgcctgggcgagctgcgcgagcaggtcatcgcc
aagttctccggcgaagaaggccagccgactgccgctgaagtcaaagagatcttcggtgaa
atcgaataccgcaccgttcgcgaaaacatcgtcaacggcaagccacgtatcgatggtcgc
gacaccaagaccgtgcgcccgctgaacatcgaagtcggcgtgctgccgaaaacccacggt
tcggccctgttcacccgtggcgaaacccaggccctggtcgttgcgaccctgggtactgcg
cgtgacgcacagctgctggacaccctggaaggcgagcgcaaagaccccttcatgctgcac
tacaacttcccgccgttctcggtgggcgagtgtggccgcatgggcggtgctggtcgtcgc
gaaatcggtcacggccgtctggcccgtcgttcggtccaggccatgctgccggccgccgac
gtgttcccgtacaccatccgcgtggtgtcggagatcaccgaatccaacggttcgagctcg
atggcttcggtctgtggcgcttccctggccctgatggacgctggtgtaccgatgaaggcg
ccggtagccggtatcgccatgggtctggtcaaagagggcgagaagttcgccatcctgacc
gacatcctgggtgatgaagaccacctgggcgacatggacttcaaggtagccggtaccgcc
aagggtgtgaccgcgctgcagatggacatcaagatcaacggcatcaccgaagagatcatg
gaaatcgccctgggccaggccctggaagcgcgcctgaacatcctcggccagatgaaccag
atcattggccagtcgcgcaccgagctgtcggaaaacgcaccgaccatgatcgcgatgaag
atcgacaccgacaagattcgcgacgtcatcggcaagggcggcgcaaccatccgtgccatc
tgcgaagaaaccaaggcgtcgatcgatatcgaagacgacggttcgatcaagatcttcggc
gaaaccaaggatgcggcagaagctgcgcgccagcgcgttctgagcatcactgccgaagcc
gagatcggcaagatctacgtcggcaaggtcgagcgcatcgtcgacttcggtgcattcgtc
aacatcctgccgggcaaggacggtctggttcacatctccatgctgagcgatgctcgcgtc
gagaaagtgaccgacatcctgaaagaaggccaggaagtcgaagtactggtactggacgtg
gacaaccgcggccgtatcaagctgtcgatcaaggacgttgccgccgccaaggcgtcgggc
gtctga
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