Pseudomonas qingdaonensis: KH389_23130
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Entry
KH389_23130 CDS
T07622
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pqi
Pseudomonas qingdaonensis
Brite
KEGG Orthology (KO) [BR:
pqi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pqi03016
]
KH389_23130 (truB)
Enzymes [BR:
pqi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
KH389_23130 (truB)
Transfer RNA biogenesis [BR:
pqi03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
KH389_23130 (truB)
Prokaryotic type
KH389_23130 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
PUA_3
LRR_FBXL18
HTH_CodY
Motif
Other DBs
NCBI-ProteinID:
QVL18246
UniProt:
A0ABX8DPN7
LinkDB
All DBs
Position
complement(5066478..5067395)
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AA seq
305 aa
AA seq
DB search
MAQVKRIRRNVSGIILLDKPLGFTSNAALQKVRWLLNAEKAGHTGSLDPLASGVLPLCFG
EATKFSQYLLESDKGYETVMQLGQTTNTGDAEGEILQTREVTVGRSDVEAVLPQFRGPIS
QIPPMYSALKRDGQPLYKLARAGEVVEREARSVTINRLELLECEGTRVRLSVGCSKGTYI
RTLVEDIGEQLGCGAYVAELRRTHAGPFELAQTVTLEELEQVHAEGGNEAVDRFLMPSDS
GLQDWPLLHFSEHSAFYWLHGQPVRAPDAPKFGMVRVQDHNGRFIGIGEVSEDGRIAPRR
LIRSE
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
gtggctcaggtcaagcgtatccgtcgtaacgtcagcggcatcatcctgctcgacaagccg
ttggggttcacctccaatgctgccctgcagaaggtgcgctggctgctcaacgccgagaag
gccggacataccggcagcctcgacccgctggccagtggcgtgctgccgctgtgcttcggc
gaggcgaccaagttctcgcaatacctgctcgagtccgacaagggctacgagacggtgatg
caactggggcagaccaccaacacgggcgacgccgaaggcgaaattctgcaaacccgcgaa
gtgaccgttggtcgcagcgacgttgaagccgtactgccacagtttcgtggtccaatcagc
cagataccgccgatgtactcggcgctcaagcgcgatggccagccgctgtacaagctggca
cgtgcaggcgaagtagtggagcgtgaagcgcgttctgttactattaaccgcttggagctg
ctcgagtgcgaaggcacccgggtacgcctctcggtaggctgcagcaagggcacctacatc
cgtacgctggtagaggacatcggtgagcagctgggctgcggcgcctatgttgcagaactg
cgccgcacgcatgcaggccccttcgaactggcccagaccgtcaccctcgaagagctcgag
caggtgcacgccgaaggtggcaacgaagcggtcgaccgcttcctgatgccatcggacagc
gggttgcaggactggccgttgctgcacttctccgagcacagcgcgttctactggctgcat
ggtcagccggtgcgtgcaccggatgcgccgaagttcggcatggtccgcgtgcaggatcac
aacggtcgtttcatcggtatcggtgaagtgagcgaagacgggcgcattgcgccacgtcga
ctgattcggtcggaatga
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