KEGG   Pseudomonas qingdaonensis: KH389_24900
Entry
KH389_24900       CDS       T07622                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
pqi  Pseudomonas qingdaonensis
Pathway
pqi03030  DNA replication
pqi03430  Mismatch repair
pqi03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pqi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    KH389_24900
   03430 Mismatch repair
    KH389_24900
   03440 Homologous recombination
    KH389_24900
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pqi03032]
    KH389_24900
   03400 DNA repair and recombination proteins [BR:pqi03400]
    KH389_24900
Enzymes [BR:pqi01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     KH389_24900
DNA replication proteins [BR:pqi03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     KH389_24900
DNA repair and recombination proteins [BR:pqi03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     KH389_24900
SSDB
Motif
Pfam: RNase_T Rv2179c-like RNase_H_2
Other DBs
NCBI-ProteinID: QVL18568
UniProt: A0ABX8DQI3
LinkDB
Position
5422844..5423554
AA seq 236 aa
MSLFAWLRPSQPALDAAQQQRLAQLPGPAPLQDHTLRAQRWVVLDLETTGLNLNRDQVLS
IGAVVIEDGAIDFSQQFERTLHRHDHKPGPSVLIHGLGPSAIAAGCVPADALLDLMAFIG
DSPLLAFHAGFDQRMLSRALKDSLGYRLQHPFIDVAELAPLLNPDVVLRDAGLDDWTAHF
GLQAGERHHASADAQVTAELALILFSQARRQHIDSPLLLEHRLQGWRRRRQHSHGF
NT seq 711 nt   +upstreamnt  +downstreamnt
atgagcctgttcgcctggctgcgccccagccaacccgcactggacgccgcccagcagcag
cgtctggcccaactgcccggcccagccccgctgcaggaccacaccctgcgcgcccagcgc
tgggtggtgctggacctggaaaccaccggcctgaacctgaaccgcgaccaggtgctgtcg
attggcgcggtggtgatcgaggacggcgccatcgacttcagccagcagttcgagcgcacc
ctgcaccggcatgaccacaagccgggccccagcgtgctgatccatggcctggggcccagt
gcgattgccgccggctgcgtgccggccgatgcactgctcgacctcatggcgttcatcggc
gacagcccgctgctggcgttccacgccggcttcgaccagcgcatgctcagccgcgccctg
aaggacagcctgggctaccgcctgcagcacccgttcatcgacgtggccgagctggccccg
ctgctcaaccccgacgtggtgttgcgcgacgccgggctcgacgactggaccgcacacttc
ggcctgcaggccggtgaacgccaccacgccagcgccgatgcacaggtcactgccgaactg
gcactgatcctgttcagccaggcgcgacgccagcacatcgacagcccgctgctgctggag
catcgcctgcaaggctggcgccggcgacggcaacacagccacggcttctga

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