Pseudomonas qingdaonensis: KH389_25660
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Entry
KH389_25660 CDS
T07622
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
pqi
Pseudomonas qingdaonensis
Pathway
pqi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pqi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KH389_25660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pqi03019
]
KH389_25660
Messenger RNA biogenesis [BR:
pqi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
KH389_25660
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
NUDIX_4
Nudt16-like
NUDIX_2
Motif
Other DBs
NCBI-ProteinID:
QVL21723
UniProt:
A0ABX8DZW1
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Position
complement(5607404..5607883)
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AA seq
159 aa
AA seq
DB search
MIDPDGFRPNVGIILTNDLGQVLWARRINQDAWQFPQGGINPEETPEDALYRELNEEVGL
ERQDVEILACTRGWLRYRLPQRLVRTHSQPLCIGQKQKWFLLRLVSNEQRVRMDLTGKPE
FDGWRWVSYWYPLGQVVTFKREVYRRALKELAPRLLARD
NT seq
480 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgaccccgatggttttcgccccaatgtcgggatcattctgaccaatgatctcggg
caggtgctatgggctcgacggatcaaccaggatgcctggcagtttccacaaggcgggatc
aaccccgaggaaacgccggaagacgccctgtaccgcgagctgaatgaagaagtgggcctg
gagcggcaggatgttgaaattcttgcctgcacccgtggctggttgcgttatcgtttaccc
caacgcctggtgcgtacccacagccaaccgctgtgcatcggccagaaacagaaatggttc
ctcctgcgcctggtgtccaacgagcagcgggtgcggatggatttgaccggtaaaccggaa
ttcgatgggtggcgctgggtcagctattggtatccgttgggccaggtggtgacattcaag
cgcgaggtttaccgccgcgctctcaaagagcttgccccgcgcctgctggcgcgcgactga
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