Pseudomonas qingdaonensis: KH389_26145
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Entry
KH389_26145 CDS
T07622
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
pqi
Pseudomonas qingdaonensis
Pathway
pqi00300
Lysine biosynthesis
pqi00470
D-Amino acid metabolism
pqi01100
Metabolic pathways
pqi01110
Biosynthesis of secondary metabolites
pqi01120
Microbial metabolism in diverse environments
pqi01230
Biosynthesis of amino acids
Module
pqi_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pqi00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
KH389_26145 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
KH389_26145 (lysA)
Enzymes [BR:
pqi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
KH389_26145 (lysA)
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
QVL18803
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Position
5703707..5704954
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AA seq
415 aa
AA seq
DB search
MDAFNYRDGELFAEGVALSAIAERFGTPTYVYSRAHIEAQYRSYADALQGVSHLVCFAVK
ANSNLGVLNVLARLGAGFDIVSGGELERVLAAGGRADRVVFSGVGKTRDDMRRALEVGVH
CFNVESTDELERLQVVAAEMGVRAPISLRVNPDVDAGTHPYISTGLKENKFGIAIADAEE
VYVRAAQLPNLEIVGVDCHIGSQLTTLEPFLDALDRLLALIDRLGECGIYLRHLDLGGGV
GVRYRDEEPPLAGDYIKAIRERVGDRDLALVFEPGRYIVANAGVLLTRVEYLKHTEHKDF
AIVDAAMNDLIRPALYQAWMDVTAVQPRDGEPRSYDVVGPICETGDFLAKDRALNLAEGD
LLAVHSAGAYGFVMSSNYNTRGRCAEVLVDADQAFEVRRRETVAELFAGESLLPE
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggacgctttcaactaccgcgacggcgagctgttcgcggaaggcgtggcgctgtcggcg
attgccgaacgcttcggcacgcctacctacgtgtactcgcgggcgcatatcgaagcccag
taccgtagctacgccgatgcattgcagggtgtttcgcacctggtgtgcttcgccgtaaaa
gccaactccaacctcggcgtgctgaacgtgctggcacgcctgggcgcaggcttcgacatc
gtctcgggcggtgaactggagcgtgtgctggccgccggcgggcgcgccgaccgtgtggtg
ttctccggcgtgggcaagacccgcgacgacatgcgccgcgccctcgaagtgggcgtgcac
tgcttcaacgtcgagtccaccgacgagctggagcgcctgcaggtggttgccgccgaaatg
ggcgtacgcgcgccgatctcgctgcgggtcaacccggatgtcgatgccggcacccacccg
tacatttccaccggcctcaaagagaacaagttcggtatcgccattgccgatgccgaagaa
gtctacgtgcgcgccgcgcagctgccgaacctggaaatcgtcggcgtcgactgccacatc
ggttcgcagctgacgacgctggagccattcctcgatgccctcgaccgcctgctggcgctg
atcgaccgcctcggcgagtgcggcatctacctgcgccacctggacctgggcggcggcgtg
ggcgtgcgctatcgcgacgaagagccgccactggccggcgactacatcaaggccatccgc
gagcgcgtgggcgaccgcgacctggcgctggtattcgaaccgggccgctacatcgtggcc
aatgccggcgtgctgctgacccgcgtcgagtacctcaagcacaccgagcacaaggacttc
gccatcgtcgacgcggcgatgaacgacctgatccgcccggcgctgtaccaggcctggatg
gacgtgaccgccgtgcagccgcgtgatggcgagccgcgcagctatgacgtggtcggcccg
atctgcgagaccggcgacttcctggccaaggaccgtgcgctgaacctggccgaaggcgac
ctgctggccgtgcattcggccggtgcctacggtttcgtcatgagttcgaactacaacacc
cgtggtcgctgcgccgaagtactggtggatgccgatcaggccttcgaagtgcgccgtcgc
gaaaccgtggccgagctgtttgccggcgaaagcctgctgccggagtga
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