Pseudomonas qingdaonensis: KH389_26205
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Entry
KH389_26205 CDS
T07622
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pqi
Pseudomonas qingdaonensis
Pathway
pqi03420
Nucleotide excision repair
pqi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pqi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
KH389_26205
03430 Mismatch repair
KH389_26205
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pqi03400
]
KH389_26205
Enzymes [BR:
pqi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KH389_26205
DNA repair and recombination proteins [BR:
pqi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KH389_26205
MMR (mismatch excision repair)
Other MMR factors
KH389_26205
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
AAA_30
UvrD_C_2
T2SSE
AAA_11
DEAD
Motif
Other DBs
NCBI-ProteinID:
QVL18814
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All DBs
Position
5714763..5716637
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AA seq
624 aa
AA seq
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MSAIKDVADEVTPTADDVIQECLNLETPRSFFLYAGAGSGKTHSLVVAVKSLKERERQRL
TFEGRQIAIITYTNAACEEIARRLEHDPLVEVSTIHAFSWKMIKGFNDDIREWLRIKLAS
DIAELDDRLGRARTVNKTSLANQASRDSKARRLAALDEIPEFTYSPTGDNVSRQSLNHSE
VIQMSAAFLPQPPLLDVMADRHPVLLIDESQDTNGALMDAFLKAQAAIPGRFCLGLLGDT
MQRIYSDGKPGLDAAIPPDWAKPEKRINRRCPIRVVELINNIRAGADDHLQIPTPEAAQG
AVRMFCTRQAPGQDFSLEDQIAEQMAEITGDAQWATGRDGRKTLILEHKMAARRMGFEGV
FAPLYAVAHLNTALMDGTLPILKVFFDGVAPIVAAARSDDFTLMEAVRLRSPLLDPKHLE
AAGNNQFELLESVGVATHALCEMLKDNNPLIEEVAQILQSSGLLALPDRLVAAMAQGATA
DPVPETSDREALEIHAYRVVLGRRYSEMAAFAGYANGLSPYGTHQGVKGLEFPRVMVILN
DEEAGGFLFSYEKLLGITPASATDMKNESEGKDTSLSRTRRLLYVTCSRAEESLAIVVYS
SQPEAARDRVIDAGWLTAEEVVVL
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgagtgccataaaggatgtcgccgatgaagtcacgccgactgcggatgacgttatccag
gaatgcctgaacctggagacgccacgtagtttcttcctatacgccggtgccggctcaggc
aagacccactcactcgtcgtagcggtgaaatcactcaaggaacgtgagcgtcagcgcctc
acgtttgaggggcggcaaatagcgatcatcacgtacaccaacgcagcctgtgaggaaatc
gcacgtcgccttgagcacgatccgctggttgaggtctcaaccattcatgctttctcttgg
aagatgatcaagggcttcaacgacgatattcgtgaatggttacgtatcaaacttgcgagc
gacatcgctgagttggacgacaggctcggtcgggcgagaacagtgaacaagacgtctctg
gctaaccaggcgagccgggatagcaaagctcgtcgtttggcggcccttgatgaaattcct
gaatttacctacagcccgacgggagacaacgtaagtaggcaatcgctgaaccacagtgaa
gtcatccagatgtctgcagcgtttttaccccagccgcctttactcgatgttatggcggat
cggcatccggtgctgctcatcgatgaaagccaagatacgaatggcgctctcatggatgca
tttctgaaagctcaggcagcgattcctgggagattttgcttaggactgctcggcgacacg
atgcagcgtatctatagcgacgggaagccagggcttgatgcggcgataccaccagattgg
gccaagcctgaaaaacgtatcaatcgccgttgcccgattcgggttgtcgaattgatcaac
aatatccgcgccggcgccgatgatcatctgcagataccaacgccggaagctgcccaaggt
gccgtacgtatgttctgcacccggcaagcgcccgggcaggatttcagcttggaagaccag
atcgctgagcaaatggcagagatcacgggtgatgctcagtgggccaccggcagggatggc
cgcaagacgctgatcctagagcacaagatggctgcccgtcggatggggtttgaaggcgtg
ttcgctccgctctatgcagttgcacatctgaataccgcgctgatggacggtacgctaccc
atcctcaaggttttcttcgatggggtcgctccaatcgtcgccgcagcccgttcggatgat
ttcacgctcatggaggcggtgcggctgcgctctcctttgcttgatcctaagcacctggag
gcggctggcaacaatcaattcgagctgctggagtctgttggggtcgcgacccatgcactc
tgcgagatgctcaaagataacaatcccttgattgaagaggtggctcaaatcctccagagt
tcgggtttgcttgcgctgcctgatcgactcgttgctgcaatggctcaaggtgccactgca
gacccagtaccagaaacgtccgatcgcgaggcgctagaaatccatgcttatcgggttgtc
ctagggcgtcgttactcagagatggcggccttcgcaggctatgcaaatggcctctcgccc
tacggtacccatcagggcgtcaaaggcctggagtttccccgcgtgatggtcatcctgaac
gacgaagaagctggtggttttctgttcagctacgagaaattactcggtattacacctgcc
tccgccacagatatgaagaatgagagcgagggtaaagatacgtcgctgtcacgcacacgc
aggcttctgtacgtcacctgcagtcgtgcagaggagagcttggctatcgtggtttacagc
tctcagccagaggctgcgagggatagagtcattgacgctggctggttgacagccgaagag
gtcgtagtgctttaa
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