Pseudomonas qingdaonensis: KH389_26895
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Entry
KH389_26895 CDS
T07622
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pqi
Pseudomonas qingdaonensis
Pathway
pqi03420
Nucleotide excision repair
pqi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pqi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
KH389_26895 (uvrD)
03430 Mismatch repair
KH389_26895 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pqi03400
]
KH389_26895 (uvrD)
Enzymes [BR:
pqi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KH389_26895 (uvrD)
DNA repair and recombination proteins [BR:
pqi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KH389_26895 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
KH389_26895 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
AAA_22
Viral_helicase1
AAA_11
HOASN
DUF1175
Regulator_TrmB
Motif
Other DBs
NCBI-ProteinID:
QVL18941
LinkDB
All DBs
Position
5863974..5866157
Genome browser
AA seq
727 aa
AA seq
DB search
MRDDLSLLLNSLNDAQRQAVAAPLGRQLVLAGAGSGKTRVLVHRIAWLIQVEQASPHSVL
SVTFTNKAAAEMRQRIEQLMGINPAGMWVGTFHGLAHRLLRAHWQEAGLNQNFQILDSDD
QQRLVKRVIRELGLDEQRWPVRQAQWFINGQKDEGLRPQHIQASGDLFLGTMRSIYEAYE
AACQRAGVIDFSELLLRALDLWRDNPGLLQHYQRRFRHLLVDEFQDTNAVQYAWLRLLAQ
GGDSLMVVGDDDQSIYGWRGAKIENIHQYSADFPDTQMIRLEQNYRSTAGILKAANALIA
NNSDRLGKELWTDGGDGEPLSLYAAFNEHDEARYVVETIESALKTGMARSDIAILYRSNA
QSRVLEEALLRERIPYRIYGGQRFFERAEIKNAMAYLRLLEGRGNDAALERVINVPPRGI
GEKTVEAIREHARHAQVSMWESMSLLVANKGLKGRAASALAAFIELIENLSAKVMDMPLH
LMTQTVIEQSGLIIYHQEEKGEKGQARVENLEELVSAARNFESAEEDAELSPLAAFLGHA
SLEAGDAQAEEHEDSIQLMTLHSAKGLEFPHVFLVGMEEGLFPHKMSLEEPGRLEEERRL
AYVGITRAMQQLVMTYAETRRLYGSETYNKVSRFVREIPAGLVQEVRLSNSVSRPFGSGQ
KQNSSSLFGAANIPETAFNLGQRVQHAVFGEGVILNFEGAGAQARVQVNFAEGSKWLMLG
YAKLEPL
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgatgacctctccctcctgttgaactccctcaacgacgcccaacgccaggccgta
gcggccccgcttggtcgccagttggttctggccggtgccggctccggtaagacccgagtg
ctggtgcaccgtatcgcctggttgatccaggtcgagcaggcctcaccccattcggtgctg
tcggtgaccttcaccaacaaggccgccgccgagatgcgccagcgcatcgagcagttgatg
ggcatcaacccggccggcatgtgggtgggtaccttccacggcctggcgcaccgcctgttg
cgtgcccactggcaggaagcggggctgaaccagaacttccagatcctcgacagcgacgac
cagcaacgcctggtcaagcgggtgatccgcgagctgggcctggacgaacagcgctggccg
gtacgccaggcgcagtggttcatcaacgggcagaaggacgaagggctgcgcccgcagcac
atccaggccagcggcgacctgttcctgggcaccatgcgcagcatctacgaggcctacgag
gcagcctgccagcgcgccggcgtgatcgacttctccgaactgctgctgcgcgcgctggac
ctgtggcgcgacaacccgggcctgctgcagcactaccagcggcgcttccgccacctgctg
gtggacgagttccaggacaccaacgccgtgcagtacgcctggttgcgcctgctggcccag
ggcggtgacagcctgatggtggtgggcgacgacgaccagtccatctatggctggcgcggc
gccaagatcgagaacatccaccagtacagtgccgacttccccgacacccagatgatccgc
ctggagcagaactaccgctccaccgccggcatcctcaaggcggccaacgccctgatcgcc
aacaacagtgatcgcctgggcaaggagctgtggaccgacggcggcgacggcgaaccgctg
agcctgtacgccgccttcaacgaacacgacgaagcgcgctatgtggtcgagaccatcgag
agcgcgctcaagaccggcatggcgcgcagcgacatcgccatcctgtaccgctccaacgcc
cagtcgcgggtgctcgaggaagccctgctgcgcgagcgcatcccgtaccgcatctatggt
ggtcagcgcttcttcgaacgcgccgagatcaagaacgccatggcctacctgcgcctgctt
gaagggcgtggcaatgacgcggcgctggagcgggtgatcaacgtgccgccgcgcggcatc
ggcgagaagaccgtggaggcgattcgcgaacacgcccgtcacgcccaggtatcgatgtgg
gagtcgatgagcctgctggtcgccaacaagggcctcaagggccgtgccgccagcgccctg
gccgcgttcatcgagctgatcgagaacctctcggccaaggtcatggacatgccgttgcac
ctgatgacccagaccgtgatcgagcagtccgggctgatcatctatcaccaggaagaaaag
ggtgaaaagggccaggcacgggtagaaaaccttgaagaactggtcagcgccgcgcgcaac
ttcgaaagcgccgaggaagacgccgagctgtcgccgctggctgcgttcctgggccacgcc
tccctcgaggccggcgatgcccaggccgaggaacacgaagacagcatccagctgatgacc
ctgcacagcgccaagggcctggagttcccccacgtgttcctggtgggcatggaagagggc
ctgttcccgcacaagatgagcctggaagagcccggccgcctggaagaggaacgtcgcctg
gcctatgtgggcattacccgcgccatgcagcagctggtgatgacctacgccgagacccgc
cgcctgtacggcagcgaaacctacaacaaggtgtcgcgattcgtgcgtgagatccctgcg
gggctggtgcaggaagtgcgcttgtccaacagcgtcagccggccgttcggctcgggccag
aaacagaattcgagcagcctgttcggtgcggcgaacatccccgaaaccgcgttcaacctc
ggccagcgcgtgcagcacgcggtgtttggcgagggcgtgatcctcaatttcgagggcgcc
ggtgcccaggcgcgggtgcaggtgaactttgccgaaggcagcaagtggctgatgcttggc
tacgccaagctggagccgctgtaa
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