Paracoccus qomolangmaensis: PXD02_00370
Help
Entry
PXD02_00370 CDS
T11782
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
pqo Paracoccus qomolangmaensis
Pathway
pqo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pqo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PXD02_00370 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pqo03021
]
PXD02_00370 (rho)
03019 Messenger RNA biogenesis [BR:
pqo03019
]
PXD02_00370 (rho)
Transcription machinery [BR:
pqo03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
PXD02_00370 (rho)
Messenger RNA biogenesis [BR:
pqo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
PXD02_00370 (rho)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
S1CSD-TOTE-2
AAA_22
NACHT
AAA_25
OB_RNB
ATPase_2
Fungal_virus_P2_C
AAA
Motif
Other DBs
NCBI-ProteinID:
WEF24462
LinkDB
All DBs
Position
complement(70723..71994)
Genome browser
AA seq
423 aa
AA seq
DB search
MSEERLNLSELKAKSPAELLSLAEEWEIENASTMRKGEMMFSILKEHAEEGFDIGGDGVL
EVVQDGFGFLRSTAANYLPGPDDIYVSPEMIRQHSLRTGDTVEGVIRAPGENERYFALTK
VERINFEDPDKARHKVAFDNLTPLYPNERLKMEIEDPTLKDRSARIIDLVAPIGKGQRSL
IVAPPRTGKTVLLQNIAHSIERNHPECYLIVLLIDERPEEVTDMQRSVKGEVVSSTFDEP
ASRHVAVSEMVIEKAKRLVEHKRDVVILLDSITRLGRAFNTVVPSSGKVLTGGVDANALQ
RPKRFFGAARNIEEGGSLTIIATALIDTGSRMDEVIFEEFKGTGNSEIVLDRKVADKRVF
PAMDILKSGTRKEELLVDSKDLQKTYLLRRILNPMGTTDAIEFLISKLKQTKSNSEFFDS
MNA
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaagaacgtctgaacctgtccgaactcaaggccaaaagcccggccgaactgctg
tccctggccgaggaatgggagatcgagaacgcctcgaccatgcgcaagggcgagatgatg
ttctcgatcctcaaggaacatgccgaggaaggcttcgacatcggcggcgacggcgtgctg
gaggtcgtgcaggacggtttcggcttcctgcggtccacggccgccaactatctgcccggc
cccgacgacatctatgtcagccccgagatgatccgccagcacagcctgcgcaccggcgat
acggtcgaaggcgtgatccgcgcgcccggcgagaatgagcgttacttcgccctgaccaag
gtcgaacgcatcaatttcgaagaccccgataaggcccgccacaaggttgccttcgacaac
ctgacgccgctttacccgaacgagcgactgaagatggagatcgaggatccgaccctgaag
gaccgttccgcccggatcatcgacctggtggcgccgatcggcaagggccagcggtcgctg
atcgtggcgccgccgcgcaccggcaagacggtgctgttgcagaacatcgcccattcgatc
gaacgcaaccatcccgaatgctatctgatcgtgctgctgatcgacgaacgccccgaggaa
gtcaccgacatgcaacgctcggtcaagggcgaggtcgtgtcctcgaccttcgacgaaccg
gccagccgtcacgtcgcggtgtccgagatggtcatcgagaaagccaagaggctggtcgaa
cataaacgagatgttgtgatccttttggactcgatcaccaggcttggtagggcgttcaac
accgtcgtccccagttccggcaaggttctgaccggcggcgtcgatgcgaacgccttgcag
cggcccaaacgcttcttcggtgccgcgcgcaatatcgaggaaggcggatcgctgaccatc
atcgcgaccgcgctgatcgacacgggctcgcggatggacgaggtgatcttcgaggaattc
aagggcaccggcaacagcgagatcgtgctggaccgcaaggtggccgacaagcgtgtcttc
ccggccatggacatcctgaaatccggaacgcggaaagaagaattgctggtcgattccaag
gacttgcagaaaacctatctactgcgccgaatcctgaacccgatgggcaccaccgacgcc
atcgagttcctgatctccaagctgaagcagaccaagtccaattcggaattcttcgattcg
atgaacgcctga
DBGET
integrated database retrieval system
