Paracoccus qomolangmaensis: PXD02_03855
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Entry
PXD02_03855 CDS
T11782
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
pqo Paracoccus qomolangmaensis
Pathway
pqo03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pqo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PXD02_03855
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pqo03021
]
PXD02_03855
03400 DNA repair and recombination proteins [BR:
pqo03400
]
PXD02_03855
Enzymes [BR:
pqo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
PXD02_03855
Transcription machinery [BR:
pqo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
PXD02_03855
DNA repair and recombination proteins [BR:
pqo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
PXD02_03855
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
Glyco_hydro_65C
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
WEF25102
LinkDB
All DBs
Position
754223..755239
Genome browser
AA seq
338 aa
AA seq
DB search
MIHKNWAELIKPTQLVVKPGADATRTATLVAEPLERGFGLTLGNALRRVLLSSLQGGAIT
SVQIDNVLHEFSSVPGVREDVTDIVLNLKGVTLKMDVEGPKRLTLSAKGPGEVKAGDIQE
TAGITVLNRDHVICHLDDGADLNMELTVQTGKGYVAADRNRPEDAPIGLIPIDAIFSPVK
RVSYEVTPTREGQVLDYDKLTMKIETDGSLTPEDAVAYAARIVQDQLSVFVNFDEPESAN
RQDAEDGLEFDPRLLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEAEMLRTPNFGRKS
LNEIKEVLSGMGLHLGMDVVDWPPENIEDLAKRFDDQF
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgatccacaagaattgggccgagctgatcaagccgacgcaattggttgtcaagcctggc
gcggatgccacccgcaccgccacgctggtcgccgaaccgctggagcggggcttcggcctg
acgctgggcaacgcgctgcgccgcgtgctgctgtcctcgctgcaaggcggggccatcacc
tcggtccagatcgacaacgtgctgcacgagttcagcagcgtccccggcgtccgcgaggac
gtgacggacatcgtcctgaacctcaagggcgtgacgctgaagatggacgtggaggggccg
aagcgcctgaccctgtccgcgaagggaccgggcgaggtcaaggcgggcgacatccaggaa
accgccgggatcacggtgctgaaccgcgatcacgtcatctgccacctggacgacggcgcc
gacctgaacatggaactgaccgtgcagaccggcaagggctatgtcgcggccgacaggaac
cgccccgaggacgcgcccatcgggctgatcccgatcgacgcgatcttctcgcccgtcaag
cgtgtcagctatgaagtcacgcccacccgcgaggggcaggtgctggactatgacaagctg
acgatgaagatcgaaaccgacggctcgctgaccccggaagacgccgtggcctatgccgcg
cgcatcgtccaggaccagctgtcggtcttcgtgaacttcgacgaacccgaatcggccaac
cgccaggacgccgaggacgggctggaattcgacccgcgcctgctgaagaaggtggacgag
ctggaactgtcggtgcgttcggccaactgcctgaagaacgacaacatcgtctatatcggc
gacctgatccagaagaccgaggccgagatgctgcggaccccgaacttcggccgcaagtcc
ttgaacgagatcaaggaagtgttgtcgggcatgggcctgcacctgggcatggacgtggtc
gactggccgccggaaaacatcgaggatctggcgaaacggttcgacgaccagttctga
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