Pectobacterium quasiaquaticum: IG609_000925
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Entry
IG609_000925 CDS
T08268
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
pqu
Pectobacterium quasiaquaticum
Pathway
pqu00071
Fatty acid degradation
pqu00280
Valine, leucine and isoleucine degradation
pqu00310
Lysine degradation
pqu00362
Benzoate degradation
pqu00380
Tryptophan metabolism
pqu00410
beta-Alanine metabolism
pqu00640
Propanoate metabolism
pqu00650
Butanoate metabolism
pqu00907
Pinene, camphor and geraniol degradation
pqu00930
Caprolactam degradation
pqu01100
Metabolic pathways
pqu01110
Biosynthesis of secondary metabolites
pqu01120
Microbial metabolism in diverse environments
pqu01200
Carbon metabolism
pqu01212
Fatty acid metabolism
Module
pqu_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
pqu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
IG609_000925 (fadB)
00650 Butanoate metabolism
IG609_000925 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
IG609_000925 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
IG609_000925 (fadB)
00310 Lysine degradation
IG609_000925 (fadB)
00380 Tryptophan metabolism
IG609_000925 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
IG609_000925 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
IG609_000925 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
IG609_000925 (fadB)
00930 Caprolactam degradation
IG609_000925 (fadB)
Enzymes [BR:
pqu01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
IG609_000925 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
IG609_000925 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
IG609_000925 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
IG609_000925 (fadB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
Motif
Other DBs
NCBI-ProteinID:
URG49199
UniProt:
A0A9Q2EUS5
LinkDB
All DBs
Position
complement(204662..206851)
Genome browser
AA seq
729 aa
AA seq
DB search
MLYQGESLYLNWLEDGIAELVFSAPGSVNKLDTRTVASLGKALDVLAEQPNLKGLLLRSD
KPAFIVGADITEFLSLFAAPAEKLHEWLVFANNIFSRLEDLPVPTLSAINSYALGGGCEC
VLATDFRLATTDARIGLPETKLGIMPGFGGTVRLPRLLGTDSALEIIAAGKDIGAADALK
VGLVQAVVANDKLVPAAIKMLKQAINGSLDWQAYRRPKLEPLKLNKIEAMMSFTTAKAMV
LQTAGKHYPAPMLAVKTIEAAATMTRDDALQLETQHFVQLARSNEARALVSIFLNDQYVK
GKAKKLIGETSIPQQAAVLGAGIMGGGIAYQSAFKGVPIRMKDINEKPLALGMNEAAKLL
NKQMERGKLDGMKMATILASIQPTLDYAGFERTDIVVEAVVENPKIKASVLAETESHVSE
NTILASNTSTIPIASLAASLKRPQNFCGMHFFNPVHRMPLVEIIRGPQTSDSTIASVVAY
ASKMGKTPIVVNDCPGFFVNRVLFPYFAAFSLLLRDGADFRDIDNVMEKKFGWPMGPAYL
LDVVGIDTAHHAQAVMAEGFPQRMAKDYRDAIDVLFEHQRFGQKNGHGFYRYQTDSKGKL
RKEQDEAVDAILQDISQPKKTFSAEEIIARMMIPMINEVARCLEEGIVASPAEADMALVY
GLGFPPFHGGACRYLDTLGSERYVEMAQQLAHLGAIYQVPDGLQQKARSNEGYYPSVAPH
ADVSYGQPA
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgctttatcaaggtgaatccctctaccttaactggcttgaggacggcattgccgagctg
gtattttctgcccctggctccgtaaacaagctagatacccgcacggttgccagcctgggt
aaagcgctggacgttctggcggaacagccgaatctgaagggcttactactacgttccgat
aaaccagcatttattgtcggtgccgatatcacagaattcctttctctttttgccgcaccg
gccgaaaagctgcatgaatggcttgtcttcgccaacaacattttcagccgccttgaggat
ttgcccgttcctacgctgtccgcgattaatagctatgcgttgggcggcgggtgtgaatgt
gtgctggcgaccgattttcggttggcaacgacggatgcgcgaatcgggttgcccgaaacc
aagctggggatcatgccgggctttggcggcacggtcaggctaccacgcctgctgggtaca
gacagcgcgctggagattatcgccgcaggtaaagacatcggcgcagccgatgctttaaaa
gtggggctggtgcaagccgttgtcgccaatgacaagctggttcccgccgccatcaagatg
ttgaaacaggcgattaatggctcactggactggcaggcttaccgacgtccgaaacttgaa
ccgctgaagctcaataagattgaagccatgatgagctttaccaccgccaaagcgatggtg
ctacaaactgcgggcaagcactatcccgcaccgatgctagcggtaaaaaccatcgaagct
gctgcgaccatgacacgcgatgacgcattgcagcttgagacgcagcacttcgttcaactg
gcgcgttccaatgaagcccgcgcactcgtcagcattttcctcaacgatcaatatgttaaa
ggcaaagcaaagaagctgattggcgagacatctataccgcagcaggcagcagtgctaggg
gcaggtattatgggcggcggcatcgcctatcaatctgcgttcaaaggcgtgccgattcgg
atgaaagatatcaacgagaagccgctcgcgttggggatgaatgaagccgctaagctcctg
aataaacaaatggagcgcggcaagctggacggaatgaaaatggcgacgattctggccagt
attcagccaacgctggattacgctgggttcgagcgcaccgacatcgtcgttgaggccgta
gttgagaacccgaaaatcaaagccagcgtgttggcagaaaccgaatcgcacgtgagtgag
aatacgattctggcttcgaatacctcaacgatcccaattgcttcactggctgcgtcgcta
aaacgaccgcaaaacttctgtggtatgcacttcttcaacccggtacaccgcatgccactg
gtcgaaattattcgcggccctcaaaccagcgatagcaccatcgccagcgtggtggcttac
gccagcaagatgggcaaaacgcccattgtcgtgaacgactgccctggattcttcgtgaat
cgggtgctgttcccctattttgctgcattcagcctattgctcagagacggtgccgatttc
cgcgatattgataacgtcatggagaaaaaattcggttggccgatgggaccggcctatctg
ctggatgttgtcggtattgataccgctcaccatgctcaggccgtgatggctgagggcttc
ccacagcgcatggcgaaagactatcgcgatgcgattgatgtgctgtttgaacaccagcgt
ttcgggcaaaagaatggtcacggattctaccgttatcaaaccgatagcaaggggaagctg
cgtaaagaacaggatgaagctgtagatgcgatccttcaggacatcagccaaccgaaaaaa
acgttcagcgcagaagagattatcgcgcgcatgatgatcccaatgattaatgaagtcgct
cgttgtctggaagaaggtatcgtcgccagccccgccgaagcagacatggcgctggtatat
gggttaggtttccctcccttccacggcggagcctgccgctatctggatacattaggtagc
gaacgttatgtcgagatggcgcaacagctggcacacctcggcgccatctatcaggtgcca
gacggcttgcagcaaaaagccagaagcaatgaaggctattacccatcggtcgcgccacac
gcggacgtttcttacggtcaaccggcatga
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