Pectobacterium quasiaquaticum: IG609_002550
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Entry
IG609_002550 CDS
T08268
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
pqu
Pectobacterium quasiaquaticum
Pathway
pqu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pqu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
IG609_002550 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pqu03019
]
IG609_002550 (groL)
03110 Chaperones and folding catalysts [BR:
pqu03110
]
IG609_002550 (groL)
03029 Mitochondrial biogenesis [BR:
pqu03029
]
IG609_002550 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pqu04147
]
IG609_002550 (groL)
Enzymes [BR:
pqu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
IG609_002550 (groL)
Messenger RNA biogenesis [BR:
pqu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
IG609_002550 (groL)
Chaperones and folding catalysts [BR:
pqu03110
]
Heat shock proteins
HSP60 / Chaperonin
IG609_002550 (groL)
Mitochondrial biogenesis [BR:
pqu03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
IG609_002550 (groL)
Exosome [BR:
pqu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
IG609_002550 (groL)
Exosomal proteins of other body fluids (saliva and urine)
IG609_002550 (groL)
Exosomal proteins of breast cancer cells
IG609_002550 (groL)
Exosomal proteins of colorectal cancer cells
IG609_002550 (groL)
Exosomal proteins of bladder cancer cells
IG609_002550 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
URG49486
UniProt:
A0A9Q2EVS9
LinkDB
All DBs
Position
complement(550735..552381)
Genome browser
AA seq
548 aa
AA seq
DB search
MAAKDVKFGNDARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREI
ELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGI
DKAVIAAVEELKALSVPCSDSKAIAQVGTISANSDETVGKMIAEAMDKVGKEGVITVEEG
TGLQDELDVVEGMQFDRGYLSPYFINKPETGAVELESPFILLADKKISNIREMLPVLEAV
AKAGKPLVIVAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGTV
ISEEIGLELEKATLEDLGQAKRVVINKDTTTIIDGTGEEAAIQGRVAQIRQQVEEATSDY
DKEKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALAATRAAVEEGVVAGGGVALV
RVAAKLASLTAQNEDQNVGIKVALRAMEAPLRQIVSNAGEEPSVVANSVKAGEGNYGYNA
ATEEYGNMIDFGILDPTKVTRSALQFAASVAGLMITTECMVTDLPKSDAPDLGGAGGMGG
MGGMGGMM
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggcagctaaagacgtaaaattcggtaatgacgctcgcgtgaaaatgctgcgcggcgta
aatgtactggctgatgcagtgaaggttaccctaggcccgaaaggccgtaatgtcgtgttg
gataaatccttcggtgcaccgaccattactaaagacggcgtatctgttgcgcgtgaaatc
gagctggaagacaagttcgagaacatgggcgcacagatggtgaaagaagttgcctctaaa
gcgaatgacgcagcaggcgacggcaccacgaccgcaaccgtattggcgcaggctatcatc
actgaaggcctgaaagctgttgcagcgggcatgaacccgatggatctgaagcgcggtatc
gataaagccgttatcgctgctgttgaagagctgaaagcactgtctgtaccgtgctctgac
tctaaagctatcgctcaggttggtaccatctctgctaactccgacgaaaccgtaggcaaa
atgattgccgaagccatggacaaagtcggtaaagaaggcgtgatcaccgttgaagaaggt
accggtctgcaagacgagctggacgtggttgaaggtatgcagttcgaccgtggctacctg
tctccgtacttcatcaacaagccggaaacgggtgctgtagaactggaaagcccgttcatc
ctgctggctgataaaaaaatctccaacatccgcgaaatgctgccagtactggaagccgta
gcgaaagccggcaaaccgctggttatcgttgctgaagatgttgaaggcgaagcgctggca
acgctggtggttaacaccatgcgtggcatcgttaaagttgctgcggtgaaagcaccgggc
ttcggcgaccgtcgtaaagcaatgctgcaagatatcgcgacgctgactggcggtaccgtt
atctctgaagagatcggtctggagctggaaaaagcgacgctggaagatctgggtcaggca
aaacgcgttgtgatcaacaaagacaccactaccatcatcgatggtacgggtgaagaagct
gcgatccagggccgtgttgctcagatccgtcagcaggttgaagaagcaacgtctgattac
gacaaagaaaaactgcaagagcgtgtggctaaactggctggcggcgtagccgttatcaaa
gttggcgcagcaactgaagttgaaatgaaagagaagaaagcacgcgttgaagatgccctg
gctgcgactcgcgccgcggtagaagaaggcgtggttgcgggtggtggtgttgcgctggtt
cgcgttgcagccaaactggcttctctgactgctcaaaacgaagaccagaacgtgggtatc
aaagttgcgctgcgcgcgatggaagcaccactgcgtcagatcgtttccaacgctggcgaa
gagccatctgtggttgcgaacagcgttaaagcgggcgaaggtaactacggttacaacgca
gcaacggaagaatacggcaacatgatcgacttcggtatcctggatccaaccaaagtcacc
cgttctgcgctgcagttcgcggcttccgttgccggtctgatgatcaccaccgaatgtatg
gttaccgacctgccgaaaagcgatgcacctgacttaggtggcgctggtggtatgggcggc
atgggtggtatgggcggcatgatgtag
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integrated database retrieval system
