Pectobacterium quasiaquaticum: IG609_003065
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Entry
IG609_003065 CDS
T08268
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pqu
Pectobacterium quasiaquaticum
Pathway
pqu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pqu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
IG609_003065 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pqu03019
]
IG609_003065 (pnp)
03016 Transfer RNA biogenesis [BR:
pqu03016
]
IG609_003065 (pnp)
Enzymes [BR:
pqu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
IG609_003065 (pnp)
Messenger RNA biogenesis [BR:
pqu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
IG609_003065 (pnp)
Transfer RNA biogenesis [BR:
pqu03016
]
Prokaryotic type
tRNA degradation factors
IG609_003065 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
RNase_PH_C
KH_1
S1_RRP5
KH_2
S1_2
OB_RRP5_4th
aRib
KH-I_KHDC4-BBP
DUF4172
KH_SLS1_2
Spt6_S1
Motif
Other DBs
NCBI-ProteinID:
URG49575
UniProt:
A0A9Q2I9B4
LinkDB
All DBs
Position
657295..659415
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AA seq
706 aa
AA seq
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MLNPIVRKFQYGQHTVTLETGMMARQATAAVMVSMDDTAVFVTVVGAKSAKPGQSFFPLT
VNYQERTYAAGRFPGGFFRREGRPSEGETLTSRLIDRPIRPLFPEGFLNEVQVIATVVSV
NPQVSPDIVAMIGASAALSLSGIPFNGPIGVARVGYLNDQYVLNPTMDELKESRLDLVVA
GTEGAVLMVESEAELLSEDQMLGAVVFGHEQQQIVIQNINALVAEAGKPKWEWHAPEVNV
SLEQRVQALSEARLGDAYRITEKQERYAQVDVIKADVVAALQAEDETLNAGDIQEILGNV
EKNVVRSRVLAGEPRIDGREKDMIRGLDVRTGVLPRTHGSALFTRGETQALVTATLGTER
DAQNIDELTGERTDRFLLHYNFPPYSVGETGMVGSPKRREIGHGRLAKRGVLAVMPKANE
FPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPIKSAVAGIAMGLVKEGDNFVVLSD
ILGDEDHLGDMDFKVAGSREGITALQMDIKIEGITREIMQVALNQAKGARLHILGVMEQA
ISSPRGDISEFAPRIHTIKISTDKIKDVIGKGGSVIRALTEETGTTIEIEDDGTVKIAST
DGEKAKHAIRRIEEITAEIEVGRVYQGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVE
KVTDYLQMGQEVPVKVLEVDRQGRVRLSIKEANAQAQEAAAPSSEE
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
ttgctgaatccgatcgtccgtaagttccaatatggtcagcataccgtcacgttagagacc
ggtatgatggcacgccaggctaccgccgctgtgatggtaagcatggatgacaccgcggta
ttcgttactgttgtcggcgctaaaagtgctaagccgggtcaaagtttcttcccgttgacg
gttaactatcaggagcgtacctacgctgctggacgtttccctggtggtttcttccgtcgt
gaaggccgtccaagtgaaggtgaaacgctgacttctcgtctgattgaccgcccgattcgc
cctctgttcccagaaggcttcctgaatgaagttcaggtgattgcgaccgttgtttctgtt
aacccacaggttagccctgacatcgttgccatgattggtgcctctgcggcgctgagcctg
tctggtattccgttcaacggccctatcggtgtcgctcgcgtcggttacctgaacgaccag
tatgtcctgaatccaacgatggacgaactgaaagaaagccgtctagatctggtggttgca
ggtacagaaggcgcggttctgatggtggaatctgaagctgagctgctgagcgaagatcag
atgctgggtgctgtggtttttggtcacgagcaacagcagatcgttatccagaacatcaac
gctctggttgctgaagcaggcaaaccgaagtgggagtggcatgcgccagaagttaacgtt
tctttagagcagcgtgtacaggctttgtctgaagcacgtctgggtgacgcttaccgcatc
actgaaaaacaagagcgttatgcacaagttgacgtcatcaaagcggatgttgttgccgct
ctgcaagctgaagacgaaacgttgaatgcgggcgatatccaggaaattctgggtaacgtt
gagaaaaatgtcgtacgtagccgcgtgctggctggcgaaccgcgtatcgatggccgtgaa
aaagatatgattcgtggtcttgatgtgcgtactggcgtactgccgcgtacccacggttct
gcactgttcacccgtggtgaaacgcaggcgttggtaaccgctacgttggggactgagcgt
gatgcgcagaatatcgacgaattgactggtgaacgtaccgatcgcttcctgctgcactac
aacttccctccgtactctgttggtgaaacgggtatggtcggttctcctaagcgtcgtgaa
atcggtcacggtcgtctggctaagcgtggcgtgttggccgttatgcctaaggcgaacgaa
ttcccgtacaccgtacgtgtcgtgtctgaaatcacagaatccaatggttcttcttctatg
gcgtctgtctgcggtgcttctttggcactgatggatgcaggtgtgccaatcaaatcagcc
gttgcgggtatcgcgatggggctggtgaaagaaggtgataactttgttgttctgtcggac
attctgggtgacgaagatcacctgggcgatatggacttcaaagttgccggtagccgtgaa
ggtatcactgcgctgcagatggatatcaagatcgaagggattacccgtgagatcatgcag
gttgctttgaatcaagccaaaggtgcacgtttacacattctgggcgtgatggagcaggcg
atcagctcaccgcgtggcgatatctctgaattcgcaccgcgtattcacaccatcaagatc
agtaccgataagattaaagacgtgatcggtaaaggtggttctgtgattcgtgcgctgact
gaagaaacgggcacgaccattgaaattgaagacgatggtactgttaaaatcgcttcaacc
gacggcgaaaaagcgaaacacgcaattcgtcgtattgaagagattactgccgaaatcgaa
gtcggccgtgtgtatcagggtaaagttacccgcatcgttgattttggtgcttttgtcgct
attggcggcggcaaagaaggcctggtgcatatttctcagatcgccgacaagcgcgtagag
aaagtgactgattacctgcaaatgggtcaggaagtgccggtcaaggttctggaagttgat
cgccagggccgcgtgcgcttaagcatcaaagaagcaaatgcgcaagcccaggaagcggca
gccccgtcttctgaggaataa
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