Pectobacterium quasiaquaticum: IG609_003505
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Entry
IG609_003505 CDS
T08268
Name
(GenBank) rhamnogalacturonate lyase
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
pqu
Pectobacterium quasiaquaticum
Brite
KEGG Orthology (KO) [BR:
pqu00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
IG609_003505
Enzymes [BR:
pqu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
IG609_003505
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Gene cluster
GFIT
Motif
Pfam:
CBM-like
fn3_3
Rhamnogal_lyase
CarboxypepD_reg
RhgB_N
CarbopepD_reg_2
BPA_C
Motif
Other DBs
NCBI-ProteinID:
URG49654
UniProt:
A0A9Q2EP52
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All DBs
Position
763859..765589
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AA seq
576 aa
AA seq
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MKRSVLLLVGAMLAPYSYSAQDNAVSLSVSGLNTVLDNGLLKIAFGEDGSAVSMVTGGKN
IVTNLSGAARDPSKTRSAYLDYYINDAHAKGVKDFVPERVEVLRNDREMAHVAYIDDRDG
LLRLEYHLIMRRGVSGLYSYVVAENSGTQDVKVSELRNVYRFDPAQLDHLYNGDRQGKPL
LYSQLEASPKVQDETWRLPDGSIYSKYDFAGYMRAAPFWGVFGNGVGAWLIHGNREYFSG
DALKQELLVHQDAIILNYMTGSHFGTPDMVAPPSWKKFYGPWLLYINQGDTGHMLADAQR
QALTEAVSWPYQWVDDSRYARERTQVSGRVASQHPVTVVLSSSLDEPFDVQTRGYSYQAI
TDAQGNFAIPHVRPGNYHLAVYANSGTQPGILAEQTLSVSGDKQVLPVIALPKAEPVVWA
IGQANRQASEFRFGNEARNTRWQHEVPANLTFDIGRSDYQRDWYYAQTKSGKWDIRFALQ
PEKKAYFLNIALAAASNSGMSEPTMPQLAVAVNGTTLETLTYANDKTIYRGALQSGRYHI
ARIPVSSRFLKNGNNTITLQLKGGSVMYDVVTLSEE
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
gtgaagcgatctgtcttgttgttggtgggggccatgctggcaccctatagctatagcgcg
caggataatgcggtgtcgttatccgtttctggtttgaataccgtgttggataacggcttg
ctgaagattgcattcggggaggatggcagcgcggtgagtatggtgacgggaggcaaaaat
atcgtcaccaatctgtccggcgcggcgcgtgacccaagcaaaacgcgtagcgcttacctc
gattactatattaacgatgctcatgctaaaggcgtcaaagattttgtccccgagcgggta
gaggtgctgcgcaacgatcgtgagatggcgcatgtcgcctatatcgacgatcgcgacggg
ctgttacggcttgaatatcacctgattatgcgtcgcggtgttagcgggctttatagctat
gtcgttgctgaaaatagcggaactcaggacgttaaagtcagtgaactacgtaacgtctat
cgcttcgatcccgcccagttagatcatctctacaatggcgatcgtcagggtaaaccgctg
ctctacagccagcttgaagcgtcgccgaaggtgcaggatgaaacctggcgattgccagat
ggcagcatttattccaaatatgattttgccggttacatgcgtgctgcgcctttctggggc
gttttcggtaacggcgtgggcgcgtggctgattcacggtaatcgggagtatttctccggc
gatgcgctcaagcaggagttgttggtgcatcaggatgcgatcatcctgaactacatgacg
ggttcacatttcggcacgccggatatggtcgctccaccgagctggaaaaaattctacggt
ccgtggctgctgtatatcaatcagggcgataccggacacatgctggcggatgctcagcgt
caggcgctgacggaagccgtcagttggccgtaccaatgggttgacgattcccgctatgcg
cgcgagcgcacgcaggtaagtggacgcgttgccagtcagcatccggtgaccgtcgtgctt
tcgtcatcgctggatgaaccgtttgatgtgcaaactcgcggctattcgtaccaggcaatc
accgatgctcaggggaattttgcgattccccatgtccgtccgggcaattaccatctggcg
gtatacgccaatagcggtacacagccgggaatattggcagaacaaacgctgtccgtttcc
ggtgataagcaagtgctgcctgtgattgccctgcctaaagccgagccggttgtgtgggct
attggacaggccaatcggcaggcgagcgaattccgctttggcaatgaggcacgcaacacc
cgctggcagcatgaggttccggcaaacctgacgttcgatattggccgcagcgactatcag
cgtgactggtattacgcacagaccaaatcgggaaaatgggatatccgttttgccctgcaa
ccggagaagaaagcctattttctgaacattgcgttggcggccgcgagcaacagtggcatg
agtgagccgaccatgccacagctggcggtagcggtgaacggtaccacgttggaaacgctg
acttacgcaaatgacaaaaccatttatcgcggtgcgctacagagtggtcgttatcacatt
gcccgcatccctgtgtcatctcgctttttgaaaaacggcaacaacacgatcacgctacaa
ttaaaaggcggcagcgtgatgtatgacgtggtgaccttaagcgaggaataa
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