Pectobacterium quasiaquaticum: IG609_004495
Help
Entry
IG609_004495 CDS
T08268
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K11908
sigma-54 dependent transcriptional regulator
Organism
pqu
Pectobacterium quasiaquaticum
Brite
KEGG Orthology (KO) [BR:
pqu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pqu03000
]
IG609_004495
Transcription factors [BR:
pqu03000
]
Prokaryotic type
Helix-turn-helix
Other families
IG609_004495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_5
AAA_16
AAA_2
Mg_chelatase
HTH_8
AAA_3
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
URG49829
UniProt:
A0A9Q2I8P7
LinkDB
All DBs
Position
982187..983725
Genome browser
AA seq
512 aa
AA seq
DB search
MQHALELALALTRQHDEAGLCDWLLETMQAAWQPQGMLLGMVDVSGRQLTCQGRVHETPV
ALSLGVDDFSHPLAYALHKNQARTWDSLYGGARIEHREFRQMLVSVGTNCGLHALPLLSE
SGKPLAVLALLDTPTRLQTLHQHGECERLAQVFCRQLMLLRELAHTRREQVALRDSLRQI
KDEGQSRREQETRVETTLIGRSVVIKELHQQIYQAAKHRLSVLIQGETGSGKEVVARLLH
QCSERADKPFIAINCAAIPENLIESELFGYQKGAFSGAQSNKIGLVEQANGGTLFLDEVG
DMPQSMQAKLLRVLETHSFRPLGAEKEVHSDFRLIAATHQPLEQQVSDGVFRQDLYHRLC
QCLLQVAPLRERPDDIRLLCEHFIGQFADKQQKHVAPLNRAFLRQLVAYEFPGNVRELRN
LLEVACAHTPDGEALSLTSLPPELRERLTSSTTEEQDRYQHIYDLRIATQRYEAAVIEAR
LRQFQGNRLLVADSLNIPKRTLDHKCQKLEVN
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgcaacatgccctcgaactggcgcttgcactcacccgacagcatgacgaggccggtctg
tgcgactggctgctggagacgatgcaggccgcctggcagcctcaagggatgctactgggt
atggtggatgtcagcggcaggcaactgacctgccagggacgagtgcatgaaacgccggtg
gcgctgagtctgggcgtggatgactttagccacccgctggcgtatgcgctgcataagaat
caggcgcgaacctgggattctctctatggcggtgcccgcattgagcaccgtgaatttcgg
cagatgctggtttctgtcgggacgaactgcgggctgcatgcgctaccgctgctgtcggag
agcggtaaaccgctggcggtgctggcgctgttggatacgccgacgcgcctgcaaacgctg
catcagcacggcgagtgcgagaggctggcgcaggtgttttgccgtcagcttatgctgctg
cgtgagctggcgcatacccgacgggagcaggtcgcgctgagagattcactccgccagatt
aaggatgaagggcagagccgtcgcgagcaggaaacgcgggtggaaacgacgctgattggc
cgatctgtcgtcattaaagaactgcatcagcagatttatcaggcggcaaaacaccgtctt
tcggtgctgattcagggcgaaaccggttcaggaaaagaggtggtggcgcgtctgctgcat
cagtgttccgaacgtgccgataaaccttttatcgccatcaactgcgcggcgatcccggaa
aacctgattgaaagcgagctgtttggctaccaaaaaggcgcgttctccggcgcacaaagt
aacaagattggtctggtcgagcaagctaacggcggaaccctgtttttggatgaagtcggc
gatatgccgcagtccatgcaggccaagctgttaagggtgttggaaacgcacagcttccgc
ccgctgggcgcggagaaagaagtgcattccgatttccgcctgattgccgcgacccatcag
ccgctggagcagcaggtgtctgacggcgtatttcggcaggatctctatcatcgtctttgc
cagtgtctgttgcaggtcgccccgctacgcgagcggccggacgatattcgtctgctgtgt
gagcacttcatcggtcaatttgcagataaacagcaaaagcacgttgcaccattgaaccgg
gccttccttcgccaattggtggcgtatgaatttcccggcaatgtgcgggaactgcgtaat
ctgctggaagtcgcctgcgcacatacgccggacggcgaagcgctgtctctgacatcgcta
ccgccggaactgcgcgagcgactgacgagcagtacaactgaggaacaggatcgctatcaa
cacatctacgatttgcgtattgccacacagcggtatgaagcggctgtcattgaggcacgg
ctgcgccagtttcagggcaatcgcctgctggtggctgatagcctcaatatccctaaacgc
actctcgaccacaaatgccagaagctggaggtaaattga
DBGET
integrated database retrieval system
