Pectobacterium quasiaquaticum: IG609_004570
Help
Entry
IG609_004570 CDS
T08268
Name
(GenBank) RHS domain-containing protein
Organism
pqu
Pectobacterium quasiaquaticum
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
Scabin-like
DUF6531
RHS
Pertussis_S1
Enterotoxin_a
DUF4112
TEN_YD-shell
OCRE
NarE
SpaA
CarboxypepD_reg
ADPrib_exo_Tox
Motif
Other DBs
NCBI-ProteinID:
URG49842
UniProt:
A0A9Q8WZG8
LinkDB
All DBs
Position
1002130..1007433
Genome browser
AA seq
1767 aa
AA seq
DB search
MSQDKSSALAASGDAAKRNFTTDNKISGGCTTCGCEILVYYHYDSGEPIPNAPFQLTDSN
NHEIRGKTDENGLFFIHDMGCSTYELILGEGSDTFDPKETVQNNPVLMSNPAYASFAGEY
FSLFVILRAQGLVEYGSVQQSVRMPLSTIPDQYKPALKRFWELERQLYGSDSELQREIRR
IQHQQAAEVASKASSIDNAVLLFCEVILGCIPVVGQVMDVYFLGKWCWDSYEDAELLNDT
MHQIDGVLCVIGFVPGAGDALKVSGNAITQALRKLKGAKGNKQQHIEEATQIIRSLSKGN
IVNWLMGIRSDIRMYADKGKKILETMKAALDLLVKSVSGERSWIVVLMADSFRAMVNVLE
KLISMFTVVTALIEDEFAEFIPQIMTQVIGSARPKGSCELSAMTVQKGGSGDYRTEEEIT
EFNQRAEKPGGLTMAEAGMMSSVGILSAMSGKGGKNRVGIASQGGKHSTSAPHASQRPHT
PSEQHPSTSSETSPNTKPQPNTKPQPKSESSSDKKPQQKPDEAKSKDKGTPQDDKETIEL
PKGTQPITPGAAHPSKPGDDGAAQKKARDQNDGTETDSNNGEKKGDPVDMATGAVVEQRT
DIQVSSPLPLSLQRYYRSTGERHPGLLGTLWRTNWDISLTLNDGVATLTDGEFNQAFFAL
PNNEGEVSRSSSNPQWRLTRQQGELVLHHVSGLRYRFEYALGLQLCLTSIDDAAGHRVTF
EWVLGELRWVALSDGRLIHVTSEHQRITTLTLCTPQHQPLKTLVSYSYDDHGHLLSVRAD
EGRNFDYRYSQEGWLLRWSDLGSTWVEHDYDKKGRAIRDRTSEGYWPGHFEYDDDTLTSH
YHSGFGGVFSYVRDERNNILLKRTPDGGETRFEWVDNQLVAEIDPLGGRTTYQRNDWGQV
TEVTLPDGTVHQYEYDDNGQLLAYIDPLGSEWCYQRNAAGQVVEVNDPEGREWLYRYGDT
GQLSTVIGPDGVLQRYHYNRRGLLSRLERDNAPPVMFRYDDLDRLTERHIGHEAGVQVRR
WEYDGVRESPSKVVYEDGSETRFGYDVEGNLTAVTDALGQRYQFRYGAFDNLLEATDPLG
ATVRYHYNAEAAFAGVTNSQGRDWTYGFDRSGRLSEERHYDGRVYRYQYDVADRLVQRTA
PDGSTLHYEHDAAGRITRITARKADGEMDGITELAYDVAGRLTKAANPDAVVEYAYNRAG
QVTSETVNGEAVQSGYDAGGQRAVVEGILAPLQLAWQSGRLSSLGIGSHQPLQFSHTAAG
EEQRRSNGSGFALRHEWSPTGLLQRQALEGADGRVNDVLERRYQYDVLDRLTGISDSHWG
EQAFRLNGAGQVTAERRDEGRRRQARLFGYDSEQNLCEVSQIAPGLGETLKVQDAVVQAS
ARYDAAGRVIERGHTQYRYDDCGRLAVKRETRPGFRPKETYFDWDVQDRLVRVSLPDGAR
WRYRYDAFGRRVSKVREGQLPSAQAVARVAYRWDGDQLIGQQQYRADGSAAREVQWVYEP
GSFRPLAQVEAQGDSTQLHYIVTDLTGTARELCSEEGEVRWRGEQGLWGTHREERRPIPL
RRYLGDAANEEVYCELRYQGQLFDAETGLYYNRHRYFDPDTAQYLSPDPIGLLGGRRAYG
YVKNPLSWVDPLGLTPKETITYRGDSRDPNTIFNEGFQPWGDSNDLFKHASDNTSPPSNF
ISTSKSPEVAAEFGSQLYTESGYVYAIRSNNGIDVNSVLGKATPFPRELEVAIPRGVKPE
NVLGVTPVNADGTFGNYSILNPKHYGW
NT seq
5304 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaggataaaagcagcgcgttagctgccagcggggatgccgcgaagcgtaatttc
accacggataataaaatttcagggggatgtacaacctgtggctgcgaaatactcgtttat
taccattacgattcgggtgaaccaataccgaatgccccttttcaattaaccgatagcaat
aatcacgagatacggggtaaaactgacgaaaatggcctgtttttcatccacgacatgggg
tgtagcacgtatgaactcattttgggggaaggcagcgatacgttcgaccctaaagaaacg
gtgcaaaacaaccccgttttgatgtctaaccctgcctatgcgagttttgccggagaatac
ttttccctgttcgtcattctgagagcgcaagggctggtggagtatgggtctgtccagcag
tcagtgagaatgccgctgagcacgataccggatcaatataaaccggcgttgaaacgcttc
tgggaattggaaaggcagctctatggaagtgatagcgagcttcaacgggaaatccgccgg
attcagcaccaacaggcggcggaggtagcgagtaaggcatccagtattgataacgccgtt
ctgctgttctgtgaagtcattttgggctgcattcccgtagtcgggcaggtaatggacgtc
tattttctagggaagtggtgctgggatagttatgaagatgctgagttattgaacgacacc
atgcatcagattgacggggtgctgtgcgtcattgggtttgttcctggtgcgggggatgcg
ctaaaagtcagtgggaatgccattacgcaagctttacggaaactgaaaggcgcgaaaggt
aacaaacagcagcatattgaggaagccactcaaattattcgcagtttgagtaaaggtaat
atagtcaactggttgatgggtatacgttctgatatcagaatgtacgctgataaagggaaa
aaaatactggaaaccatgaaagcggcgctggatctgctggtgaaaagtgtttctggtgag
cgcagttggatcgttgtgctgatggctgacagctttcgagccatggtgaacgtcctcgaa
aaattaatctcaatgtttaccgttgtcacggcattaattgaggatgaatttgctgaattt
atccctcaaatcatgacgcaggttattggcagtgctcggcctaaagggagctgcgagtta
tctgccatgacggtgcaaaaggggggatcgggtgactatcgtaccgaagaggaaatcact
gaatttaatcaacgggcagaaaagcctggtggcttgacgatggctgaggccggaatgatg
tcgtcagtagggatactttctgctatgtcaggaaaaggcggtaagaatagagtcggtata
gcctctcagggcgggaaacattcgacgagcgccccacatgcctctcaacgcccacataca
ccgtctgagcagcacccttccacgtcatcggaaacatcgccgaacactaaaccgcagcca
aacactaaaccacagccaaaaagtgaatccagcagcgataaaaaaccacaacaaaaacct
gatgaagcaaaaagcaaagataaaggcacgccgcaagatgataaggaaacgatagaacta
cctaaaggcacgcagcccataacgcccggtgctgctcatccatcgaagccaggtgacgat
ggcgcagcacagaagaaggctcgagatcagaacgacggtactgagactgattctaataat
ggtgagaaaaagggtgacccggtcgatatggcaaccggggcggtggtggagcagcgcact
gatattcaggtcagcagtccgctgccgctttcattgcaacgttattatcgttccacggga
gagcgacatcccggtttgttggggacgctgtggcgtactaactgggatatcagcctgacg
cttaacgatggcgtagcgacgctaacggacggtgaattcaatcaggcattcttcgccctg
ccaaataatgaaggggaggtcagtcgctcatcgtcaaacccacaatggcggttgacccgg
cagcagggtgaactggtactccaccatgtcagtggcctacgctatcggtttgaatatgcg
ctcggtctccaactttgtttgacatctatcgacgatgctgcgggccatcgagtgactttc
gaatgggtgttgggtgaactgcgttgggttgctttgtcggacgggcgtttaatccacgtc
acatcggaacaccaaaggattacgacactcacactatgcaccccgcagcaccagccctta
aaaacgctggtgagctatagctatgacgatcatgggcatttactgagcgtacgggcagat
gaggggcgtaattttgactatcgctactcacaggaaggctggctgttacgctggtcggac
ttaggttcgacctgggttgagcacgactacgataaaaaaggccgcgccatccgcgacaga
acgtcggaaggctactggccgggtcacttcgaatacgacgatgacaccctgaccagccac
taccacagcgggtttggtggggtattcagctatgtgcgcgatgaacgtaataatatcctg
ctcaaacgcacacccgacggtggtgagacccggtttgagtgggtggacaaccaactggtg
gccgagatcgatccgctggggggccgcacgacatatcagcgtaacgactgggggcaggtg
accgaggttactctccctgacggtacggtgcatcaatatgaatatgatgataacggacaa
ctgctggcctatatcgatccgctaggcagcgaatggtgctaccagcgtaatgcggccggg
caggttgtcgaggtaaatgacccggaagggcgagagtggctgtaccgttatggtgacacg
gggcagctgtcgacggtgataggcccggatggtgtgttgcagcgttatcactataaccgc
cgtggcctgctgagccgccttgagcgggataatgcgccaccagtcatgttccggtatgac
gaccttgaccgcctgacggagcggcatatcgggcatgaagcgggcgtgcaggtgcggcgc
tgggagtatgacggcgtgcgcgagtcaccgtcgaaagtggtatatgaagacggcagcgag
acgcggtttggttacgatgtggaaggtaacctgacggcggtgacggatgcactggggcag
cgctaccagttccgctatggggcgttcgataacctgctggaggcgaccgacccgctggga
gcgacggtacgctaccactacaatgcggaagcggcgttcgccggggtgacgaacagtcag
ggacgggactggacgtacggctttgaccgcagtggacggttgagcgaggaacgacattac
gacgggcgggtgtaccgctatcagtacgatgtagccgaccgtctggtgcagcgcaccgcg
ccggatggcagcacgctgcactacgaacatgatgcggcagggcggataacgcgcatcacg
gcgcggaaagcggacggggaaatggacggcatcacggaactggcgtatgacgtggccggt
cggctgacgaaagccgccaacccggatgcggtggtggaatacgcctataaccgggcgggg
caggtgacgtcggaaacggtcaacggcgaggcggtgcagagcggttacgacgcgggtggt
cagcgtgcggtggtggaagggattctggccccgctgcagctggcgtggcagtcaggtcgg
ctgtcatcgctgggtatcggctctcaccagccgttgcagttcagccacacggcagcgggg
gaagagcagcgacgcagtaacggcagcgggtttgcattacgccacgagtggagcccgacg
gggctgttgcagcgtcaggcgctggaaggggcggacggccgggtgaatgacgtgctggag
cgtcgttatcagtacgatgtgctggaccggctgacgggcatcagcgacagccactggggt
gaacaggcgttccggctgaacggggcgggtcaggtcacggcagagcgccgtgatgagggg
cggcggcgtcaggcacggctgtttggctacgacagcgaacagaacctgtgcgaggtgtcg
cagatagcaccgggtctgggcgagacgctgaaggtgcaggatgcggtggtgcaggcgtcg
gcgcggtacgatgcggcgggacgggtcatcgagcggggtcatacgcagtaccggtatgat
gactgcgggcgtctggcggtgaagcgggaaacgcggccggggttcaggccgaaggaaacg
tactttgactgggacgtgcaggaccgtctggtgcgggtaagcctgccggacggggcacgc
tggcggtatcgctacgatgcgtttggccgcagagtcagtaaggtacgtgagggacaactc
ccttcggcgcaggcggtcgcgcgggtggcgtaccggtgggacggtgaccagttgattggt
cagcagcagtaccgtgcggacgggtcagcagcacgggaagtacagtgggtatacgagccg
ggaagcttccggccgctggcacaggtggaggcgcagggcgacagcacacaactgcactac
atcgtgaccgacctgacaggaacggcgagagagttgtgcagcgaggaaggggaagtccgc
tggcgcggggaacaggggctgtggggcacacacagggaagagcgacggcctatcccgctg
cggcgctacctgggcgatgcggcgaacgaagaggtgtactgcgagctgcgttatcagggg
cagttgtttgatgcggaaacgggattatattataatcggcaccgttattttgatccggat
acagcgcagtatttgtcgcctgacccgatagggctgctgggtggtagaagggcatatggt
tatgtaaaaaatccgctcagttgggtagatccccttggattgacaccgaaggaaacaata
acgtaccgaggggattcaagagatcctaatactatttttaatgaaggttttcagccttgg
ggggatagtaatgatctttttaaacacgcttccgataatacatctccccctagtaatttt
ataagcacatctaaatcaccagaagtagccgcagaatttggttcgcagctctatacagaa
agtggctatgtgtacgctataagatctaataatggcatagatgttaattctgtattggga
aaagcgacaccattccctcgtgaattagaggtcgcaattcctcggggagttaaaccagag
aatgtattaggtgtaactccggttaatgccgatggaacttttggaaattatagtatatta
aatcctaagcattatgggtggtga
DBGET
integrated database retrieval system
