Pectobacterium quasiaquaticum: IG609_005135
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Entry
IG609_005135 CDS
T08268
Symbol
pcnB
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
pqu
Pectobacterium quasiaquaticum
Pathway
pqu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pqu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
IG609_005135 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pqu03019
]
IG609_005135 (pcnB)
Enzymes [BR:
pqu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
IG609_005135 (pcnB)
Messenger RNA biogenesis [BR:
pqu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
IG609_005135 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Gad2
Motif
Other DBs
NCBI-ProteinID:
URG50916
UniProt:
A0A9Q8TUL6
LinkDB
All DBs
Position
complement(1105615..1107054)
Genome browser
AA seq
479 aa
AA seq
DB search
MYPSLSRCIIFSRVANFCRKVLNRENEMVESEEPRQHLTVIPRDQHTISRSDISDNALKV
LYRLNKAGYEAYLVGGGVRDLLLGKKPKDFDITTNATPEQVRKLFRNCRLVGRRFRLAHI
MFGPEVIEVATFRGHHEQHQEQQEVKNSSQQAQSGMLLRDNIFGSVEEDAQRRDFSINSL
YYSISDFSVRDYTDGLNDLRQGVIRMIGDPETRYREDPVRMLRAVRFAAKLNMTVSPETA
EPIPRLASLLHDIPAARMFEESLKLLQSGYGYPTYKMLCEYQLFQPLFPLLSRYFTPNGD
STLERMVAQVLKNTDQRLQNDMRVNPAFLFSAMLWYPLIEHAQKLAQESGLAYLDAFSLA
MNDILDEQCRSLAIPKRITSLVRDIWQLQMRLSRRQGKRAYKLMEHPKFRAAYDLLCLRA
EIENHQELLRLAQWWGEFQVAAPPRQQNMLKSLDDGPTPHRRSRPRRPRKPTTARRDPA
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atttatccatcactatcgaggtgtattatcttttcccgagttgctaatttttgtcgtaag
gtactgaatcgtgagaacgaaatggtcgaatcagaggaaccgcgccagcatctgacggtg
attccgcgtgaccaacatactatttcacgcagcgatatcagcgataacgcgctgaaagta
ctttatcgcctgaacaaagcgggctacgaggcttatctggttggcggcggcgtacgcgac
ctgcttctgggcaaaaagccgaaagattttgatatcaccactaacgccacccccgaacaa
gtgcgcaagctattccgtaactgtcgtttggtcgggcgtcgtttccgtctcgcccacatc
atgttcgggccagaggtgattgaagttgccacgttccgtggtcaccacgaacagcatcag
gaacagcaagaagtcaaaaactcctctcagcaggcccaaagcggcatgctgttacgcgac
aatatttttggttccgttgaagaagacgcccaacgccgcgatttctcgatcaacagcctc
tactacagcatttctgatttcagcgtacgtgactataccgatggcctgaacgatctgcgt
cagggcgtcatccgtatgattggcgatcccgaaacacgctaccgtgaagacccggtgcgt
atgctgcgcgccgtccgtttcgccgccaagctgaacatgacggtcagcccggaaaccgct
gagccgattcctcgtctggcctcattgctgcacgatattcctgcggcgcgcatgtttgaa
gagtcgctgaagctacttcaatcgggctatggctatccaacctataaaatgctgtgtgaa
taccagctgttccagccgcttttcccgctgctgagtcgctacttcacaccaaacggcgat
tccacattggagcgcatggttgcacaggtgctgaaaaataccgatcagcgcctgcaaaat
gatatgcgagtcaatccagcgtttttgttttccgccatgctgtggtatccgctgattgaa
catgcacaaaaattggctcaggaaagcggactggcctacctcgatgccttctcgctggcg
atgaacgatatactggatgagcagtgccgttctctggcaattcctaagcgcattacgtct
ttagtccgtgatatctggcagttacaaatgcgtctgtcgcgtcgtcagggtaaacgcgct
tataagctgatggaacaccctaaattccgcgccgcgtatgacctgctttgcctgcgtgcc
gaaatcgaaaaccatcaggagctgctgcgcctggctcagtggtggggagaattccaggtt
gccgcaccgccacgtcagcaaaacatgctgaaatcgctggatgacggcccgacgccacat
cgtcgttcccgccctcgtcgaccgcgtaaaccgacaacagcacgtcgagatccagcctaa
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