Pectobacterium quasiaquaticum: IG609_011105
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Entry
IG609_011105 CDS
T08268
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
pqu
Pectobacterium quasiaquaticum
Brite
KEGG Orthology (KO) [BR:
pqu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pqu03016
]
IG609_011105
Enzymes [BR:
pqu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
IG609_011105
Transfer RNA biogenesis [BR:
pqu03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
IG609_011105
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
S1CSD-TOTE-2
PilZ
Motif
Other DBs
NCBI-ProteinID:
URG47392
UniProt:
A0A9Q2ERA9
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All DBs
Position
2422987..2424921
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AA seq
644 aa
AA seq
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MFQDNPLLAQLKQQLHSQTPRVEGVVKGTDKGFGFLEADGQKSYFIPPPHMKKVMHGDRI
TATLHTEKEREIVEPETLIEPFLTRFVGRIHKKDDRLSITPDHPLLKDAIPCRAARDVTH
DFQEGDWAVAEMRRHPLKGDRGFHAELTQYITTGDDPLVPWWVTLSRHNLERTAPEVETT
ERHDDELVREDLTALSFVTIDSASTEDMDDALYVQENDDGSLQLTIAIADPTAYVVAGSE
LDNIARQRAFTNYLPGFNIPMLPRPLSDDICSLRPDERRPVLACRVTIAADGALGDDIHF
FAAWIESKAKLAYDNVSDWLENQGEWQPQNDVIAEQIRLLHRLCLARSEWRTTHALVFKD
RPDYRFLLGEKGDVLDIVVEHRRIANRIVEESMIAANVCAAIVLRDKLGFGIYNVHNGFD
PASIEQAVAVLDTHGVQADAQALLTLEGFCTLRRELDAQPTQFLDSRIRRFQSFAEVSTT
PGPHFGLGLEAYATWTSPIRKYGDMVNHRLLKAVITGQAAEKPQDDVTIQLAERRRLNRM
AERDVGDWLYARYLKDKAGTDSRFNAEIIDITRGGLRVRLLDNGAVAFIPSSFIHAVRDE
LVCSQEMGTLSVKGEVVYRQGDTLDVVIAEVRLETRSIVAKPAA
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaagataatccgctgcttgcacagctaaaacagcaacttcactctcagacaccg
cgtgttgaaggtgtcgtcaaaggcaccgataaaggatttggctttcttgaagctgacgga
caaaaaagctatttcattccccctccgcacatgaaaaaagtgatgcacggtgaccggatt
accgccaccctgcatacggaaaaagagcgggaaattgtcgagccagaaacgctgatcgaa
cccttccttacccgatttgttgggcgcatccataaaaaagacgaccgcttatccattacg
cctgaccacccgctgctgaaagatgccattccttgccgcgccgcgcgcgatgtcacgcac
gattttcaggaaggcgattgggccgtagccgaaatgcgccgtcacccgttgaagggcgac
cgtggatttcatgctgaactgacgcagtacatcacgacgggcgatgacccgctggtgccg
tggtgggtgacattgtcacggcataatctggagcgcacggccccagaggttgaaacgact
gagcgccatgatgacgaactcgtccgtgaagatctcactgcattaagtttcgtcactatc
gacagcgccagcaccgaagatatggacgatgcgctatacgtacaggaaaacgacgatggt
tcactgcaattaaccatcgcgattgccgatccgaccgcgtatgtcgtagcgggtagcgag
ttggacaacattgcacgccagcgcgcctttaccaactatctgcccggtttcaacatcccg
atgctgccgcgcccgctgtcggacgatatctgttccctgcgcccggacgagcgccgccct
gtcctcgcctgccgcgtgacgattgccgccgacggtgcgttgggtgacgacattcacttc
tttgccgcctggatcgaatccaaagccaagttagcgtatgacaacgtctctgactggctg
gaaaatcaaggcgaatggcagccgcaaaacgacgtaattgctgaacaaattcgtttactg
caccgcctctgtctggctcgtagcgaatggcgcaccacccacgcgctggtatttaaagat
cgcccagattaccgcttcctgctgggtgagaaaggcgatgtgttggatatcgtggttgaa
catcgccgcatcgccaaccgtatcgttgaagaatccatgattgcggccaacgtctgtgcg
gccattgtgctgcgcgataagctgggtttcggcatctataacgtgcacaacggcttcgat
cctgcgtctattgaacaggcggttgccgtattggatacccacggcgttcaagctgacgcg
caagcgctattgacgctggagggcttctgcacgctgcgccgcgaactggatgcccagccg
acacagttcctggacagccgcattcgtcgcttccaatcgttcgcggaagtgagcaccacg
ccggggccgcactttggtctggggctggaagcctacgccacctggacatcgccgatccgt
aaatacggcgacatggtgaaccaccgtttgttgaaagcggttatcaccggacaggcagcg
gaaaaaccgcaggacgacgtcacgatacagctggcagaacgccgccgccttaatcgtatg
gctgagcgcgatgtcggtgactggctgtacgcccgctaccttaaagataaagccggtacg
gatagtcgcttcaatgcggaaatcatagacatcacacgtggtggcctgcgcgttcgcctg
ctggacaacggcgcggtggcgtttatcccgtcctcctttatccatgccgtgcgtgatgag
ctggtatgcagtcaggaaatgggcaccctgtcagtgaaaggcgaagtcgtttatcgccaa
ggagatacgttggacgtcgttatcgctgaggttcgtctggaaacccgcagcatcgtggca
aaacctgccgcgtaa
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