Pectobacterium quasiaquaticum: IG609_015050
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Entry
IG609_015050 CDS
T08268
Symbol
sbcD
Name
(GenBank) exonuclease subunit SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
pqu
Pectobacterium quasiaquaticum
Brite
KEGG Orthology (KO) [BR:
pqu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pqu03400
]
IG609_015050 (sbcD)
DNA repair and recombination proteins [BR:
pqu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
IG609_015050 (sbcD)
Archaeal homologous recombinant proteins
IG609_015050 (sbcD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
URG51023
UniProt:
A0A9Q2IBR3
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Position
3285843..3287081
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AA seq
412 aa
AA seq
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MRIIHTADWHLGQYFYTKSRAAEHQAFLNWLIVQVEQHQVDAIIVAGDIFDNGSPPSYAR
EMYYSFVVALQRTGCQLIVLGGNHDSVAMLNESRELLACLNTQVIACASDDPAQQVLLLE
NRQRQPRALLCAIPFLRPRDVLTSKAGQSGDEKQLALQEAITAHYQQCYQLACQKRDELG
LPLPIIATGHLTTIGATPSESVRDIYIGTLDAFPAQAFPPADYIALGHIHRPQRVTQSEH
IRYSGSPIPLSFDELNSEKSVCLVSFAPDALPQTPPQIDILSIPMTQPMQLIKGSLSDIE
QQLATFKNYQGDKPVWLDIEINTQDYLSDMQKRIQAMTENLPVEVLLLRRTREQRLQAIT
RQDKETLNELSVHDVFERRLVTETDMEDSRQQRVRTLFNQVIDELENSETAK
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgcgcattatccatactgccgattggcatttagggcaatatttttataccaaaagccgc
gctgctgagcatcaggcttttctaaactggcttatcgttcaggtggaacaacaccaggtc
gatgccattatcgttgctggcgatatttttgataacggctctcctcccagctatgcgcgg
gaaatgtattatagcttcgtggtcgcgctacagcgcacaggctgccagctcattgttctc
ggcggtaaccacgattctgtcgcgatgctaaatgaatctcgcgaactgctggcctgcctg
aacacgcaagtgattgcctgcgccagcgacgatccggcccaacaggtgctcctgctagaa
aaccgtcaaagacagcccagagccctgctctgcgcgattccttttttacgtccgcgtgat
gtgttgaccagcaaagccgggcaatccggggatgaaaaacagctggcactacaggaagcg
attaccgcgcactaccagcaatgttatcaactggcttgccaaaagcgcgacgagcttggc
ctgccgctgccgattatcgcaaccggacatctgacgacgattggcgcaaccccctcagaa
tccgtacgcgatatctatattggtacgctcgatgccttccctgctcaggcttttccgcct
gcggattatatcgcgctcggccatattcaccgcccgcagcgcgtgacccaaagcgagcat
attcgctacagcggttcgcccatcccgttgagttttgatgagctaaacagcgagaaatcg
gtctgtctggtgagctttgcacctgacgcgttaccgcaaacgcctccgcagatagacatc
ctgtcaattcccatgactcagccgatgcaattgattaaaggtagcctgagcgatattgaa
caacagctggccaccttcaagaattatcagggcgataaacccgtgtggttggatattgaa
atcaacacgcaggattatctgagcgacatgcaaaaacgcattcaggcgatgaccgagaac
ctgcccgtagaagtgctgctgctgcgccgcacgcgtgaacaacgcctgcaggcgattacc
cgacaggacaaggaaacgctgaacgaactgagcgtacatgacgtttttgagcgtcgtctg
gtaacggagacagacatggaagacagccgccaacagcgtgttcgcacgctgtttaatcag
gttattgacgaactggaaaatagcgagacggccaaatga
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