Pectobacterium quasiaquaticum: IG609_015520
Help
Entry
IG609_015520 CDS
T08268
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
pqu
Pectobacterium quasiaquaticum
Pathway
pqu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pqu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
IG609_015520 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pqu03400
]
IG609_015520 (recD)
Enzymes [BR:
pqu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
IG609_015520 (recD)
DNA repair and recombination proteins [BR:
pqu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
IG609_015520 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
RecD_N
AAA_30
UvrD_C_2
Viral_helicase1
Helicase_RecD
AAA_11
SH3_13
AAA_22
UvrD-helicase
SLFN-g3_helicase
AAA_16
nSTAND3
Herpes_Helicase
PhoH
DEAD
MukB
AAA_28
UvrD_C
T2SSE
FtsK_SpoIIIE
CbiA
AAA
DUF87
SRP54
ResIII
AAA_17
Flavi_DEAD
TrwB_AAD_bind
ATPase
NTPase_1
AAA_24
Motif
Other DBs
NCBI-ProteinID:
URG48183
UniProt:
A0A9Q2F0H5
LinkDB
All DBs
Position
complement(3389962..3391845)
Genome browser
AA seq
627 aa
AA seq
DB search
MIVLLETALARRLLRPLDVQFARMLADETTPDLLLTAACLSAHSGAGHVCLPLENLQAQT
LFDGREPELAQQLLTEAGLNTVAAWRQRLLASDAVSDGSQPTPLVLQGEKLYLQRSWQSE
GRVARFIASERDTVLVDEPAIRAVLDRLFPDVGEEVNWQKVAAAVALTRRIAVISGGPGT
GKTTTVAKLLAALIELNTGETLRIQLAAPTGKAAARLTESLGQALHRLAVDPLLRDAFPQ
EATTLHRLLGAVTDSQRLRHHQDNPLHLDVLIVDEASMVDLPMMANVIAALPPHARIIFL
GDRDQLASVEAGAVLGDICRFAEVGYSRARAQQLQRLTGCKLDESGPEGQTTVSDSICLL
RRSYRFDPHSGIGQLALAVNDGDDARVRSVLNGEFADITCSPLTAAEEYQAMLAQCVEGY
RDYLQLVAAGATPDAVLLAFQRYRQLCALREGSFGVAGLNQRIEQALHQAGLIQRSRNPL
NRWYLGRPVMIERNDAALGLFNGDIGIAMMGGSGELRVFFPLPNGETKDVTPSRLPPHDT
AYAMTVHKSQGSEFDHTALVLPNHYLPVLTRELVYTAITRARQRLSLYTDVRILCRAVKT
PTQRYSGLEERISALMVRSSASKMPFS
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgattgtgttacttgaaacggcactggcgcggcggttactgcgcccgctggatgttcag
ttcgccagaatgctggcggatgagacaacgcccgatctgctgttgaccgcggcctgcctg
agtgcacattcgggcgcggggcacgtgtgtttgccgctggagaacttgcaggcgcagacg
ctgtttgacggccgcgagcctgagctggcacaacagctactcacggaggcagggctaaac
acggttgccgcatggcggcagcgcttactggcgtccgatgccgtcagcgacggaagccag
ccgacgccgttggtgttgcaaggagaaaagctgtacttacagcgtagctggcagagtgaa
ggccgcgtggcgcggtttatcgccagcgagcgcgatacagtcctcgtcgatgaacccgcg
atccgagcggttcttgatcggctgtttcctgacgtgggcgaagaggttaactggcagaag
gtcgctgcggctgtcgccttgacgcgccgcattgcggtgatttccggcgggccgggaacg
gggaaaaccacgacggtggccaaattgctggcggcgctaattgagctgaatacgggagag
acgttacgtattcaactggctgcgccgactgggaaagcggctgcgcggctcacggagtcg
ctagggcaggctctgcaccgtctagcggtggatcctttgttgcgggatgcgtttccgcag
gaagcgacaaccctgcatcggcttttgggggcggtgacagacagtcagcgcctgcgtcac
catcaggacaacccgctacatttggatgtgctgattgtggatgaggcgtcgatggtcgat
ctgccgatgatggcgaatgtgatcgctgcgcttccgccacacgccagaattatctttctg
ggtgaccgcgatcaactggcgtccgtcgaggcgggggcggtgttgggcgatatctgtcgt
tttgccgaggttggctatagccgcgcgcgggcgcagcaattgcagcggctgacgggttgt
aagctggatgaaagtggtcctgaaggacagacgacggtcagtgacagtatctgtctattg
cgccggagctaccgtttcgatccgcattccggtattggccaactggcgctggcggtgaac
gacggtgatgacgctcgtgtgcgttctgtgttaaacggcgagtttgccgatattacctgt
agcccgttaaccgcggctgaggagtatcaggccatgctggcacagtgtgtcgaagggtat
cgtgattatctacagcttgtggcggcgggagccacgccggacgctgtgctgcttgctttc
cagcgctatcgccaactgtgcgcattgcgcgaagggtcatttggcgtagcagggctgaat
cagcgcattgagcaggctttgcatcaggctgggctgattcagcgtagccgtaatccgctt
aaccgctggtatctcggccgaccggtcatgattgaacgtaacgatgccgcattaggcctg
ttcaatggggatatcggtatcgccatgatgggaggaagcggtgagctgcgcgtatttttc
ccgttgccaaatggcgaaaccaaagacgttacgccaagccgtctgccgccgcatgacacc
gcctatgcgatgacagtgcataaatcgcagggatcggagtttgatcatacggcgctggtg
ctgccgaaccactatttaccggtgctgacgcgggagctggtgtataccgccatcacgcgt
gcgcgccagcgtttgtcactctataccgatgtccgcattctctgccgggcggtgaaaacg
ccaacgcagcgctatagcggcttggaagagagaattagcgcattaatggtgcgctcttct
gctagtaagatgccattcagttag
DBGET
integrated database retrieval system
