Pectobacterium quasiaquaticum: IG609_018470
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Entry
IG609_018470 CDS
T08268
Name
(GenBank) Y4yA family PLP-dependent enzyme
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
pqu
Pectobacterium quasiaquaticum
Pathway
pqu00300
Lysine biosynthesis
pqu00470
D-Amino acid metabolism
pqu01100
Metabolic pathways
pqu01110
Biosynthesis of secondary metabolites
pqu01120
Microbial metabolism in diverse environments
pqu01230
Biosynthesis of amino acids
Module
pqu_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pqu00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
IG609_018470
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
IG609_018470
Enzymes [BR:
pqu01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
IG609_018470
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
URG48702
UniProt:
A0A9Q2EV76
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All DBs
Position
complement(4032382..4033785)
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AA seq
467 aa
AA seq
DB search
MSNLFSFAAVSSLPVAQAHWPERLTPYLDSEIEQFLFNSPQRLSWLVEQYGSPLNIVWPH
TVANNIAALRTVLQRHDVDCRLYYGAKVNKSPGLVQAAVNAGVGVDVSSLQELKDALRAG
CDGARLCATGPAKTREFLTALVHHRALIVLDSPEEFDEVLALADVLRVTDPVRVLLRYRP
SFAQASRFGMLADEVAICLEALSTRQAVLHLEGFHFHLGGYDPDTRVAAFAEVLPLLDRA
RSKGLQPAMIDIGGGLPIQYLSASRYQDYLAKQNAADYRHGQVPTSFYPYGGERSAVDYL
EAFLSASIGQDRVADVLKQYSLILAIEPGRSLADQSAITVFRVTRTRRQPDGNHVVFVEG
SSFSACETWFNSEFLIDPLHVFSVKKDTRPTPGKAWIAGHSCLDDDVITNRLIHFRTVPQ
SGDLLIYANTAGYQMDLLENAFHRHPLPARLCAFKGKKGELIFSSDN
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacctgtttagctttgccgcagtgtcttccctccctgtcgcgcaggcccactgg
cctgagagactgacgccttatctggatagtgagattgagcagtttcttttcaactcgccg
caaaggctgtcgtggctggttgagcagtatgggtcgccgctgaatattgtctggccgcac
actgtggccaacaatatcgcggcattgcggacagtgttgcagcgtcacgacgtggactgc
cgcctgtactatggcgcgaaggtgaacaaatcgccggggctggtacaggcggcggttaac
gcgggtgtcggcgtggatgtttccagcttacaggaactgaaagatgcgctgcgggcaggc
tgcgacggcgcgcggctgtgcgccaccggcccggccaaaacgcgtgagttcctgacagcg
ctggttcatcaccgcgcgcttatcgtgctggattcaccggaagagttcgacgaggtgctc
gcgctggcggatgtgctgcgcgtgacggatcccgtgcgggttctgctgcgctatcgcccg
tcgttcgcgcaggccagtcggtttggcatgctggccgatgaggttgcaatctgtctggag
gcgttgagcaccagacaggctgtgcttcatctggaaggcttccatttccatctcggcggc
tatgatcccgatacccgcgtggcggcattcgctgaggtactgccattactggatcgtgca
cgctcaaaggggttgcagcccgcgatgattgatatcggcgggggattgccgattcaatat
ctttcggcttcacgctatcaggattatttagcgaagcagaatgcggcggattaccgccac
ggtcaggtgccgacctcgttttacccgtatggcggtgagcgctcggctgtcgactatctt
gaggcattcctgtctgcctcaatcgggcaggatcgcgtggcggacgtactaaaacagtac
agcctgattctggcgattgagccggggcgcagtctggccgaccaaagcgcgattaccgtg
tttcgcgtcacgcgcacgcgccgccagccggatggtaaccacgtcgtgtttgtcgaaggc
agcagcttcagcgcgtgtgaaacctggtttaactctgagtttttgattgatcctctgcat
gttttttccgtcaaaaaagacacacgtccgacgccgggtaaagcctggatcgccggacac
agctgtctggacgacgatgtcattacgaaccgattgattcattttcgaaccgtgccgcag
tcaggcgatttactgatttacgcgaatacggcgggataccagatggacctgctggaaaac
gcgtttcatcggcatccgctgcctgcgcgcctgtgtgcgttcaaaggtaagaaaggtgag
ctgattttttccagtgataactga
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