Pectobacterium quasiaquaticum: IG609_018785
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Entry
IG609_018785 CDS
T08268
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
pqu
Pectobacterium quasiaquaticum
Pathway
pqu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pqu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
IG609_018785 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pqu03019
]
IG609_018785 (recQ)
03400 DNA repair and recombination proteins [BR:
pqu03400
]
IG609_018785 (recQ)
Enzymes [BR:
pqu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
IG609_018785 (recQ)
Messenger RNA biogenesis [BR:
pqu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
IG609_018785 (recQ)
DNA repair and recombination proteins [BR:
pqu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
IG609_018785 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
URG48756
UniProt:
A0A9Q2ERV5
LinkDB
All DBs
Position
complement(4106836..4108665)
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AA seq
609 aa
AA seq
DB search
MSTAEVLNKEALAVQVLRDTFGYQQFRPGQQEIISATLSGQDCLVIMPTGGGKSLCYQIP
ALVMDGLTLVVSPLISLMKDQVDQLQAYGVSAACLNSTQTREQQLEVMAGCRTGQIKLLY
IAPERLTTDSFLDHLAHWQISLIAVDEAHCISQWGHDFRPEYRALGQIKQRFPHLSFIAL
TATADEATRNDIVRLLDLQSPLIQISSFDRPNIRYTLVEKFKPLDQLWMFVQGQRGKSGI
IYCNSRSRVEDISARLQARGLSAGAYHAGLDNERRAQVQEAFLRDDLQVVVATVAFGMGI
NKPNVRFVVHFDIPRNIESYYQETGRAGRDGLAAEAALFYDPADMAWLRRCLEEKPAGPQ
LDIERHKLNAMGAFAEAQTCRRLVLLNYFGEGRQEACGNCDICLDPPKRYDGLVEAQKAL
SCVYRVGQRFGLGYVVEVLRGANNQRIRDFGHDKLPVYGIGKDKSQEHWVSVLRQLIHLG
LLNQNITMHSAVQLTESARPVLRGEMPLQLAVPRVINLKPRANQKSYGGNYDRKLFAKLR
KLRKSIADEDNIPPYVVFSDATLLEMTELMPITAGELLNINGVGHRKLERFGAPFMNMIR
DHVDNNDDE
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
gtgtctacggcggaagtattgaataaggaagcgctggcggttcaggttctgcgggacacg
ttcggctaccagcaattccgaccgggtcagcaggaaattatcagcgcgacgctcagtggg
caggactgtctggttatcatgccgacaggcggcggcaaatcgctgtgctatcaaatccct
gcgctggtaatggacgggctgacgctggtggtgtctccgttgatttcactgatgaaagat
caggtcgatcagcttcaggcttacggcgtttcggcagcctgcctgaattctacgcagacg
cgcgagcagcagcttgaggtgatggcgggttgtcgtaccggtcaaatcaagctgctttat
attgcgcctgaacgcctgacgacggacagcttcctcgatcatcttgcccattggcagatt
tccctgatcgcggtggatgaagcgcattgcatttcccaatgggggcacgatttccgccct
gaataccgggcgctggggcagattaaacagcgtttccctcatctttcttttattgcgctg
accgctaccgccgacgaggccacgcgtaacgatatcgttcgcctgttggatctccagtcg
ccgctgattcagatcagcagctttgatcgcccgaatattcgctacacgctggtggaaaag
ttcaagccgctcgaccagctctggatgttcgtgcaggggcagcgtggaaaaagcggcatc
atctactgcaatagccgctcccgcgtggaggacattagcgcacgcttgcaggcccgtggg
ctgagcgcaggcgcttatcacgctggattggataacgagcgacgtgcacaggtacaggaa
gcgttcctgcgtgacgatctccaggtggtggtcgcgaccgtcgcctttggtatgggcatc
aacaaacctaacgtgcggttcgtggtgcattttgatattccgcgcaacatcgaatcctac
tatcaggaaacggggcgagctgggcgtgatggcctcgccgccgaagctgcgctgttctac
gatccggcggatatggcgtggctacgccgctgcctagaagaaaaaccggctgggccgcag
ttggatatcgagcgtcataagctcaatgcgatgggcgcatttgccgaagcgcagacctgc
cgccgtctggtgctgctgaactatttcggtgaaggacgccaagaggcctgcggcaactgt
gatatttgtctcgatccgccaaagcgctatgacgggttggtcgaagcgcaaaaggcgctc
tcctgcgtgtatcgggtcgggcagcgcttcggtttagggtatgtcgtcgaggtgctgcgc
ggggcgaataaccaacgtatccgtgacttcggccatgacaaactaccggtttatggcatt
ggtaaagataaatcgcaggagcattgggttagcgtgctgcgccagttgattcatctgggc
ttgctgaaccagaacatcacaatgcattccgctgtacagcttaccgaatctgcgcgcccc
gtgttacggggggaaatgccgttacagcttgccgtgccgcgtgtgattaacctgaagcct
cgcgcgaatcagaaatcttacggtggaaattacgaccgcaagctgtttgccaaattgcgc
aaactgcgtaaatccatcgcggatgaagacaatattccgccttacgtagtgttcagtgat
gccacgctactggagatgacggagctgatgccgatcaccgccggtgagttgttgaatatc
aacggggttggacaccgtaaactcgaacgtttcggtgcgcctttcatgaacatgattcgc
gatcatgtcgataataatgatgacgagtga
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