Pectobacterium quasiaquaticum: IG609_018810
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Entry
IG609_018810 CDS
T08268
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pqu
Pectobacterium quasiaquaticum
Pathway
pqu03420
Nucleotide excision repair
pqu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pqu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
IG609_018810 (uvrD)
03430 Mismatch repair
IG609_018810 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pqu03400
]
IG609_018810 (uvrD)
Enzymes [BR:
pqu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
IG609_018810 (uvrD)
DNA repair and recombination proteins [BR:
pqu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
IG609_018810 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
IG609_018810 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
PhoH
Motif
Other DBs
NCBI-ProteinID:
URG48761
UniProt:
A0A9Q2IB84
LinkDB
All DBs
Position
complement(4113229..4115391)
Genome browser
AA seq
720 aa
AA seq
DB search
MDVSDLLDGLNDKQRAAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLLSVENCSPYSIMAV
TFTNKAAAEMRHRIDHLIGTSQGGMWIGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL
RLLKRLIRALNLDEKQWPPRQAMWFINGKKDEGLRPQHIESYGNPIEQTWQRVYQAYQEA
CDRAGLVDFAELLLRAHELWLNKPHVLNHYRERFTNILVDEFQDTNRIQYAWIRMLAGDS
AKVMIVGDDDQSIYGWRGAQVENIQLFLKDFAGAETIRLEQNYRSTSNILKAANALIAHN
GGRLGKNLWTDGAEGEPISLYCAFNELDEARYVVNRIKAWQENGGALSDNAILYRSNAQS
RVLEEALLQQSMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGD
RTLDVVRQTARDRQLTLWQATRALLQEKVLAGRAAASLQRFIELIDALAYETSELPLHIQ
TDRAIKDSGLWNMYEQEKGEKGQARVENLEELVTATRQFSYQEEDQDLMPLQAFLSHAAL
EAGEGQADANQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAY
VGVTRAMQKLTITYAESRRLYGKEAYHRPSRFVGELPEECVEEVRLRASVSRPVNHQRLG
TPITQNDSGYKLGQRVRHAKFGEGTIVNLEGSGDHARLQVAFQGQGIKWLVAAYARLETV
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttctgatctgcttgatggcctcaacgacaaacagcgtgccgcggtagccgcg
ccgcgcagcaatttattggtgctggcgggggcaggcagcggcaaaactcgggtactggtt
catcgcattgcctggctcttgtccgtcgaaaactgttcgccgtactccatcatggcggtg
acgtttaccaacaaagcagcggcggagatgcgccaccgtatcgatcacctgatcggcacc
agccagggcggcatgtggattggcactttccacgggctggcacaccgcctgctgcgtgcg
caccatatggatgccaatctgccacaggatttccagattctggacagcgaagatcagctg
cgtctgctgaagcgtctgattcgggctctcaacctggatgagaaacagtggccgccgcgt
caggcgatgtggttcatcaacgggaagaaagatgaaggactgcgcccgcagcacattgaa
agctacggcaaccctatcgaacaaacgtggcagcgcgtgtatcaggcctatcaggaagcg
tgcgatcgtgccgggctggtggatttcgccgaactgctgctgcgcgcacacgaactgtgg
ctgaacaagccacatgtgctgaaccactatcgcgaacggtttactaacattctggtggat
gaattccaggataccaaccgcatccaatacgcttggatccgtatgctggcgggcgacagc
gccaaggtgatgatcgtcggggatgacgatcagtcgatttacggctggcgcggggcgcag
gtcgaaaatattcagctgtttctgaaagatttcgccggtgcagaaacgatccgtctggag
cagaactatcgctcgaccagcaacatcctgaaagcggcgaatgcgctgattgcccacaac
ggcgggcgactcggcaagaacctgtggaccgatggcgcagagggcgagcccatctcgctg
tattgcgcgttcaacgagctggatgaggcgcgttatgtcgtcaaccggattaaagcctgg
caggaaaatggtggggcgctgagcgataatgccattctgtatcggagcaacgcccagtcg
cgtgtactggaagaggcgttgttacagcagagtatgccgtaccgtatctacggcggcatg
cgcttcttcgaacgtcaggaaattaaagatgcgctgtcttatctgcgcctgatcgctaat
cgtaacgatgatgcggcgttcgagcgtgtggtgaatacgccgacgcgtggcattggcgat
cgcacgctggacgtggtgcgtcagacggcgcgcgatcgtcaactgacgttgtggcaagcc
acgcgggcgttgttgcaggaaaaagtgctggcgggccgcgcggcggcatcgctacagcgc
tttatcgaactgattgatgcgctggcctatgaaacctctgaactgccgctgcatattcaa
accgaccgagcgattaaggattccggcctgtggaacatgtacgaacaggaaaaaggcgag
aaagggcaggcgcgagtagaaaacctggaagaactggtgacggctacgcgccagttcagt
tatcaggaagaagatcaggatctgatgccgcttcaggctttcctgtcgcatgccgcgctg
gaagcaggcgaaggtcaggctgacgccaatcaggacgcggtgcagctcatgacgctgcac
tcggcgaaagggctggaattcccgcaggtgtttatcgtcgggatggaagagggcatgttc
cctagccagatgtcgctggatgaaggcgggcgtctggaagaagagcgtcgtctggcttat
gtcggcgtcacgcgtgcgatgcaaaaactgacgataacctacgcggaatcccgccgttta
tacggcaaagaagcctatcaccggccttcccggtttgtcggcgagctgccggaagagtgt
gttgaagaagtgcggttacgcgccagcgtctcccgtccggttaatcatcagcgcctcggc
acgccgataacgcaaaacgacagcggctacaaattagggcagcgggttcgccatgcgaaa
ttcggcgaaggtacgatcgtgaatctggaaggcagcggcgatcacgcccgtcttcaggtc
gcgtttcaagggcaaggcattaaatggctagtcgccgcttatgccagactggaaacggtg
tga
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