Cutibacterium avidum: PALO_01525
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Entry
PALO_01525 CDS
T02632
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
pra
Cutibacterium avidum
Pathway
pra03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PALO_01525
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pra03400
]
PALO_01525
Enzymes [BR:
pra01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
PALO_01525
DNA repair and recombination proteins [BR:
pra03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
PALO_01525
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
AGJ76927
LinkDB
All DBs
Position
complement(329571..330464)
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AA seq
297 aa
AA seq
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MRIASFNVNGIRAALKRGFSDWMETRDCDVIGLQEVRCRPADLPEGAFGDRHVSWAPGSL
AGRNGVALLTRTAPAEVRSWGTHLVMTPGETPNLDEVRTGITDRLPAELLPFADEGRYIE
VDLADAPVTVACLYLPKGATPDPKDEKSIAKQDRKMTFLAGFREYLATRRQECAAQGRHV
LLMGDFNIAHENADLKNWKSNQRNEGFLPEERQWFDTILSPETLVDVVRAQHPDVNGPYS
WWSWRGKAFVNDAGWRIDYHLASPELARKAVTAEIDRDPSYAERTSDHAAVVVDYDL
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcgccagcttcaacgtcaacggcatccgagctgccctgaaacggggattctcc
gactggatggagacccgtgactgcgacgtcatcggcctgcaggaggtgcgctgccgtccc
gccgatctcccggagggggcgttcggcgatcgtcacgtctcctgggcgccgggttcgttg
gccggacgcaatggcgtcgccctgctcacccgcaccgctccggccgaggtcagatcctgg
ggcacccacctcgtcatgacccccggggagacacccaatctcgacgaggtccgcaccgga
atcaccgatcgactaccagctgagctgcttcccttcgctgacgaggggcgctacatcgag
gttgatctcgccgacgcacccgtcaccgtcgcctgcctgtacctgcccaagggagccact
ccggaccccaaggacgagaagtccatagccaagcaggaccgcaagatgaccttcctcgcc
gggttccgtgagtacctggcgacccgacgccaggagtgcgcggcccaggggcgtcatgtc
cttctcatgggcgacttcaacatcgcccatgagaacgccgacctcaagaactggaagtcc
aaccaacgcaacgagggattcctgcccgaggagaggcagtggttcgacaccatcctgtct
cccgagaccctcgtcgacgtcgtgcgcgcccagcaccctgacgtcaacggcccctattcc
tggtggagctggcgtggcaaggccttcgtcaatgacgccggatggcgtatcgactatcac
ctggcctcaccggagctggcgaggaaggccgtcacagccgagatcgaccgagacccctcc
tatgccgagcgcacctccgaccacgcggccgtcgtcgtcgactacgacctgtga
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