Cutibacterium avidum: PALO_01875
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Entry
PALO_01875 CDS
T02632
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
pra
Cutibacterium avidum
Pathway
pra03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pra00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PALO_01875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pra03021
]
PALO_01875
03400 DNA repair and recombination proteins [BR:
pra03400
]
PALO_01875
Enzymes [BR:
pra01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
PALO_01875
Transcription machinery [BR:
pra03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
PALO_01875
DNA repair and recombination proteins [BR:
pra03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
PALO_01875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
SAM_EPH
HHH_5
Motif
Other DBs
NCBI-ProteinID:
AGJ76995
LinkDB
All DBs
Position
399169..400188
Genome browser
AA seq
339 aa
AA seq
DB search
MLIAQRPTLTEESISEFRSKFIIEPLEPGFGYTIGNSLRRTLLSSIPGASVTSIKIEGVQ
HEFSTIEGCVEDVTEIILNLKGLVLSSEEDEPVAMYLRKSGAGEITAADINPPAGVTIHN
PDLHIATLNDDGRFEMELIVERGRGYVSSALNDDPNSEIGRIAVDSIYSPVLKVTYKVEA
TRVEQRTDFDKLVVDVETKPSIQPRDAVASAGKTLVELFGLTRELNADAEGIEIGAGPVD
EEYAESLGTPVEELNLTVRSYNCLKREGIHTVGELVSRSEQDLLAIRNFGSKSIDEVKEK
LTELGLALKDSAPGFDPLAAAEAYDEASDDDDYAETEQY
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgctcatcgcacagcgtcccaccctcaccgaggagtccatctccgagttccgctcgaag
ttcatcatcgagcccctggagcccggcttcggctacaccatcggcaactcgctgcgtcgc
accctgttgtcgtccatcccgggcgcctccgtgacgagcatcaagatcgagggagtccag
cacgagttctccaccatcgagggctgtgtcgaggacgtcaccgagatcatcctgaacctc
aagggcctggtcctctcctccgaggaggacgagcccgtcgccatgtacctgcgcaagtcc
ggcgccggcgagatcaccgctgccgacatcaacccgccggccggtgtgaccatccacaac
ccggacctgcacatcgccaccctcaacgacgatggccgcttcgagatggagctcatcgtc
gagcgtggacgcggctacgtgtccagcgccctcaacgacgacccgaactccgagatcggt
cggatcgccgtcgactccatctactccccggtcctcaaggtcacctacaaggtcgaggcc
acccgagtcgagcagcgcaccgacttcgacaagctcgtcgtcgacgtcgagaccaagccg
agcattcagccgcgcgacgccgtcgcctctgccggtaagacccttgtcgagctgttcggt
ctgacgcgtgagctcaatgccgacgccgagggcatcgagatcggtgccggcccggttgac
gaggagtacgccgagagcctcggaaccccggtcgaggagctcaacctcaccgtccgttcc
tacaactgcctcaagcgcgagggcatccacaccgtcggagagctcgtctcccgctccgag
caggatctgctcgccatccgcaacttcggatccaagtccatcgacgaggtcaaggagaag
ctgaccgagctcggcctggctctcaaggactccgccccgggctttgatccgctcgccgcc
gccgaggcttacgacgaggccagtgacgacgatgattacgcggagaccgagcagtactga
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