Cutibacterium avidum: PALO_01945
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Entry
PALO_01945 CDS
T02632
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
pra
Cutibacterium avidum
Brite
KEGG Orthology (KO) [BR:
pra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pra03016
]
PALO_01945
Enzymes [BR:
pra01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
PALO_01945
Transfer RNA biogenesis [BR:
pra03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PALO_01945
Prokaryotic type
PALO_01945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-ProteinID:
AGJ77009
LinkDB
All DBs
Position
complement(412812..413648)
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AA seq
278 aa
AA seq
DB search
MNRWRMDIAYDGANFSGWAAQPDRRTVQGELETWIPRVLRLGEPTPLTVAGRTDAGVHAR
GQVAHVDLPDDIDTSSMLRRLARVLNPDVVVRSIRPVPGEFDARFSALWRRYVYRLWDES
SRPDPLTRFHVASVRGHLDLDRLNMAGDSLLGLHDFAAFCKYREGATTIRTLLDCHAERL
DDPCGTIEVTVRADAFCHSMVRSLIGALTAVASGRRDQHWLDEVAASTSRASSVLVMPAC
GLTLEEVGYPADEDLAERAARARSRRSHDELCDTCWED
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgctggcgtatggacatcgcctacgacggggcgaatttctcggggtgggcggca
cagccggatcgtcgcaccgttcagggagagttggagacatggattccccgggtgctccgg
ctcggcgagccaaccccactgacggtggctgggcgaactgacgccggggtccatgcccgc
ggccaggtggcccacgtcgaccttcccgacgacatcgacacctcctcgatgctgcgccgg
ttggcgcgggtcctcaatcccgacgtcgtcgtcaggtccatccgccctgtccccggcgag
ttcgacgcccgcttctcggccttgtggcgtcgttacgtctaccggctgtgggacgaatcc
tcccgacccgatccgctgacgcgattccacgtggcatccgtacgagggcacctcgatctt
gaccgcctcaatatggccggcgattcccttctcggactgcacgacttcgccgccttctgc
aagtaccgcgagggcgcgacaactatccgcaccctcttggactgccacgccgaacgtctc
gacgacccatgcgggaccatcgaggtgaccgtccgggccgatgccttctgccactccatg
gtgaggtccctcatcggagctctgacggccgtcgcctccggccgccgcgaccagcactgg
ctcgacgaggtcgccgccagcacgtcgcgggcctcgtcggtgctcgtcatgccagcctgc
ggactcaccctggaggaggttggctacccagccgacgaggaccttgccgagcgtgccgcc
cgagcgcgttcccgtcgaagccacgacgaactctgcgacacctgttgggaggactga
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