Cutibacterium avidum: PALO_02330
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Entry
PALO_02330 CDS
T02632
Name
(GenBank) DNA polymerase
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pra
Cutibacterium avidum
Pathway
pra03030
DNA replication
pra03430
Mismatch repair
pra03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PALO_02330
03430 Mismatch repair
PALO_02330
03440 Homologous recombination
PALO_02330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pra03032
]
PALO_02330
03400 DNA repair and recombination proteins [BR:
pra03400
]
PALO_02330
Enzymes [BR:
pra01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PALO_02330
DNA replication proteins [BR:
pra03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PALO_02330
DNA repair and recombination proteins [BR:
pra03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PALO_02330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Antimicrobial14
Motif
Other DBs
NCBI-ProteinID:
AGJ77086
LinkDB
All DBs
Position
complement(499812..500969)
Genome browser
AA seq
385 aa
AA seq
DB search
MASSMTVPQWLRRLLRHPERATPKDLRDLSAMVDDSDRIVPMYRGRDNGRWRQEIAALKR
EGDYEQALVLASGCMFSMFSMAQEAPDTADESWVIEVAKILRRMRYYPEEARTIEFWLNL
GIESSRIDEHLDLWKRRARAQELWAKVEGRDATEYHEEWRRLVEAGRRTKDTMSLDWTVV
SQPPAPHAVAPIRKGRATRTPRHSKLIPSPEQMACGTFVAVDFETANRQGGVSACQLAMV
RVSEGRIVDRFNSLLRPPPGWDAFQFTYLHGISAADVQHSPMWPEIADEISEFVADSPVY
AHNAMFDSRVWRQLDEYFGTVTLPSPFFCSYRTAQRLIRGLPNYKLPTVLQACEPNYHLN
HHRADSDAEACALIVCQLQRLASQL
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atggcatcgagcatgacagtgccgcagtggctgcgcaggctgttgcgtcatcccgagcgt
gcgacaccgaaagaccttcgcgatctctccgcgatggtggacgactccgaccgaattgtc
ccgatgtaccgaggccgagacaatggccggtggcgtcaggagatcgcggccctcaagcgt
gagggtgactacgaacaggcgttggtcctggcatccggatgcatgttctcgatgttctcg
atggcgcaggaggcccctgacaccgccgacgagtcctgggtcatcgaggtggcgaagatc
ctccgccgaatgaggtactaccccgaggaggcgcggacgatcgagttctggctcaacctg
ggtatcgagtcctcccggatcgacgaacacctagacctgtggaaacgtcgggccagggcc
caggaactgtgggccaaggtggagggccgcgacgccacggaatatcacgaggaatggaga
cgtctggtggaagccggcagacggacgaaggacaccatgtccttggactggaccgtcgtc
agtcaacccccggcgccgcacgccgtggcccccatccggaagggccgcgcgacacggacg
ccccgacattccaaactgattccctcaccggaacagatggcctgcggcaccttcgtcgcc
gtggacttcgagacggccaaccggcagggcggggtgtccgcatgtcagctcgccatggtc
agggtgagtgaaggccgaatcgtcgaccgattcaactccctgctgcgtcctcctcccgga
tgggacgctttccagttcacctacctgcacggcatctccgcggcagatgtccagcactcc
ccgatgtggcctgagatagccgacgagatctcggaatttgtcgccgactcccccgtctac
gcccacaatgccatgttcgactcccgggtgtggcgccagctcgacgagtacttcggcact
gtcaccctgccgtccccgttcttctgctcctaccggacggcccaacgcctcatccgtggt
ctgcccaattacaagcttccgacggtgcttcaggcctgtgaaccgaattaccacctgaat
caccaccgggcggactccgacgccgaggcgtgcgccctcatcgtctgccaattgcagcga
ctggccagccaactctga
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