Cutibacterium avidum: PALO_03845
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Entry
PALO_03845 CDS
T02632
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
pra
Cutibacterium avidum
Pathway
pra03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pra00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
PALO_03845 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pra03019
]
PALO_03845 (rnc)
03009 Ribosome biogenesis [BR:
pra03009
]
PALO_03845 (rnc)
03036 Chromosome and associated proteins [BR:
pra03036
]
PALO_03845 (rnc)
Enzymes [BR:
pra01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
PALO_03845 (rnc)
Messenger RNA biogenesis [BR:
pra03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
PALO_03845 (rnc)
Ribosome biogenesis [BR:
pra03009
]
Eukaryotic type
90S particles
RNase
PALO_03845 (rnc)
Prokaryotic type
rRNA processing factors
PALO_03845 (rnc)
Chromosome and associated proteins [BR:
pra03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
PALO_03845 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
AGJ77379
LinkDB
All DBs
Position
847917..848654
Genome browser
AA seq
245 aa
AA seq
DB search
MSARKDQNVSSPEYGEWPFLGLLKELGIRCDPQLLDLALTHRSYAFENGGIPTNERLEFL
GDAVLEVGVTDYLYRAFPDKPEGQLAKLRSAVVSTVSLGRLARRLGIGPRIKLGKGEERT
GGHDKTSILADTTEALLGAVELSSGLPDVLRLVHHLFDPLVDEADRSGAGTDWKTVLQEY
CAEQGFEAPRYDIVGSGPDHNRRYCARAEVDGKLHAAYTGHNKKEAEQGAAQLAVAALIP
PRTGA
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgcacgaaaggaccagaacgtcagttcacccgagtacggggagtggcctttcctg
ggtcttctcaaggagttggggatcagatgtgacccccaactcctcgatctcgcgctcacg
caccgctcctatgcctttgagaacggtgggattcccaccaacgagaggttggagttcctc
ggtgacgccgtcctcgaggtcggcgtcactgattacctctaccgcgccttcccggacaaa
ccggaaggtcagctcgccaagctgaggtcagccgtcgtgagcacggtgtccttggggcgg
ttggctcgtcgcctcggcatcgggccgcgtatcaagctgggcaagggcgaggaacgtacc
ggcggccacgacaagacgtcgatcctggccgacaccaccgaggccctgctgggtgccgtc
gagctgtcctcgggactgccggacgttctgcgcctcgtccatcatctcttcgatcccctc
gttgacgaggcggatcgatccggagccggtaccgactggaagacagttctccaggagtac
tgcgctgagcaggggtttgaggctccgcgctacgacatcgtcggatcaggcccggaccac
aatcgccgctactgcgccagggcagaagtggatggcaagctgcacgctgcctacactggc
cacaacaagaaggaggccgagcagggagcggcccagcttgcggttgccgcactgatccct
cctcgcactggtgcctga
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