Cutibacterium avidum: PALO_06025
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Entry
PALO_06025 CDS
T02632
Name
(GenBank) ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
pra
Cutibacterium avidum
Brite
KEGG Orthology (KO) [BR:
pra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pra03009
]
PALO_06025
Enzymes [BR:
pra01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
PALO_06025
Ribosome biogenesis [BR:
pra03009
]
Prokaryotic type
ribosomal protein modification factors
PALO_06025
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TraT
YajR_YAM
Motif
Other DBs
NCBI-ProteinID:
AGJ77813
LinkDB
All DBs
Position
complement(1328216..1329661)
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AA seq
481 aa
AA seq
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MSAGDHLMTVHLVSMGCARNDVDSEELAARMEAGGFRLVDDPSEAETVVVNTCGFIEQAK
KDSVDTLLAAADLKGHGPTQSVVAVGCMAERYGRELAESLPEADAVLGFDDYDDIADRLR
TILDGGSIEAHVPHDRRTLLPISPVDRRPASSGVSIPGHGTAPDLSATMAPASGPRATRR
RLGSGPSTALKMASGCDRRCAFCAIPRFRGSYLSRPAAEIVEEARWLVDHGVKEVFLVSE
NSSSYGKDLGDLRALEKLLTGLDNVDGLEWIRVSYLQPAELRPGLVDTMLATAKVVPYFD
LSFQHASGPLLRRMRRFGDAESFIDIIESIRSRCPEAGFRSNFITGFPGETEADVEILAD
FLQRARLDVAGIFAYSDEEGTEGATLDGHVDEDVIAARREDLADLIDELVSQRAEDRVGT
RSRVMIEETGEAIVGRAEHQGPEVDGVVTLVDSAEVSVGDIVDVDFVGSDGVDLVARPVL
T
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
gtgtctgccggtgatcacctcatgacagtccatctcgtgtcgatgggctgcgcccgcaac
gacgtcgattccgaggagcttgcggcccgcatggaggctggcggattccgtctcgtcgac
gaccccagcgaggccgagacggtcgtcgtcaacacctgcggattcatcgagcaggccaag
aaggactccgtcgacaccttgctggcggccgcagacctcaagggccacggacccactcag
tcggttgtagcggttgggtgcatggccgagcgctacggacgtgaactggccgagtccctc
cccgaggctgacgccgtgctgggattcgacgactacgacgacatcgccgatcggcttcgc
accatcctcgacgggggatccatcgaggcccatgttccgcatgaccgtcgcaccctactt
ccgatcagcccggtcgatcgcaggccagccagctctggtgtgtcgattcccggccatggc
accgcccctgatctgtcggccacgatggccccggcctcgggccctcgagccacccggcgc
cgtctcggctcgggacccagcacagcgctgaagatggcctcgggctgtgatcgtcgctgt
gccttctgtgccatcccgcgattccggggctcctacctctcccgacctgccgccgagatc
gtcgaggaagcacgctggctggttgaccatggcgtcaaggaggtcttcctcgtcagtgag
aactcctcctcctacggcaaggacctgggggatctgcgcgctctggagaaactcctcacc
ggcctggacaatgtcgacgggctggaatggattcgggtgtcctacctgcaacccgcagag
cttcgaccggggctcgtcgacaccatgctggcgaccgccaaggtcgtgccctacttcgat
ctgtccttccaacacgcatcagggccgttgttgcgccggatgcgccgcttcggtgacgcc
gagtccttcatcgacatcatcgagtccatccgttcgcgttgtccggaagccggcttcagg
tcgaacttcatcaccggcttccccggcgagaccgaggccgatgtcgagatcctcgccgat
ttcctgcagcgggcgcggctcgatgttgctggcatcttcgcctattccgacgaggaaggc
accgagggagccaccctcgacggccatgtcgacgaggacgtgattgctgctcgacgcgaa
gatctcgccgatctcatcgacgaactcgtctcccagcgcgccgaggatcgtgtcggcacc
cgtagtcgggtcatgattgaggagaccggcgaagccatcgtcggcagggcggagcatcag
ggcccggaggtcgacggggtcgtgaccctcgtcgattctgccgaggtgagcgtcggcgac
atcgtggacgtcgatttcgtcggctctgacggcgtcgacctcgttgcgcgcccggtactg
acctga
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