Cutibacterium avidum: PALO_06945
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Entry
PALO_06945 CDS
T02632
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pra
Cutibacterium avidum
Pathway
pra03030
DNA replication
pra03410
Base excision repair
pra03420
Nucleotide excision repair
pra03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PALO_06945
03410 Base excision repair
PALO_06945
03420 Nucleotide excision repair
PALO_06945
03440 Homologous recombination
PALO_06945
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pra03032
]
PALO_06945
03400 DNA repair and recombination proteins [BR:
pra03400
]
PALO_06945
Enzymes [BR:
pra01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PALO_06945
DNA replication proteins [BR:
pra03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
PALO_06945
DNA repair and recombination proteins [BR:
pra03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
PALO_06945
NER (nucleotide excision repair)
GGR (global genome repair) factors
PALO_06945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
HHH_5
DNA_pol_lambd_f
Motif
Other DBs
NCBI-ProteinID:
AGJ77997
LinkDB
All DBs
Position
complement(1533732..1536410)
Genome browser
AA seq
892 aa
AA seq
DB search
MSETTQPTLMVLDGHSMAFRAFYALPVENFITSTDQHTNAVHGFVAMLINLLRNEKPTHI
AVAWDLAGGTFRTTEYSEYKAGRAATPPEFPGQIDLIKEVLDALHIVHLSKENYEADDIL
ATLSTRATAEGFKSLLVSGDRDAMQLVNDQVTVLYPRKGVSDLARMTPEGVEEKYLVPPA
RYPELAALVGESADHLPGVPGVGPKTAVKWLNTYDGLENLIREADTVRGKAGQSFRDHLD
DVIRNRKLNALVRDLDLDVTLADLARQPWDPKATRAVFDTLEFRTLWDRVRALASESDAD
EVVEIDEALDVSGAVLEPGTLGDWLSTAEGRIGVDVTGTWGSGSGDVEAVALGAGDGTAV
WFDTADLGPGDEKAFAQWLADEAHAKAMHSAKGPVEALAERGWEVKGLTCDTELASYLLH
PDRRTHKFDDAVRTHLNVTLGEGEEQSDQGMLDFGDDRSAETMEGAVAVTKLADVMEKEV
EARGGSELLHDVEMRVQRCLISMERAGIAVDTDVLEGLRSEFDERVTRAQEAAWEAAGEK
INLSSPKQLQGILFDKLDMPKTRRTKSGYTTDADALAGLYEKTEHPFLAHLLEHRDAIKL
RQTVDGLLKEVRDDGRVHTTYMQTIAATGRLSSKDPNLQNIPMRTEEGRRIREGFVVGEG
YESLMSADYSQIEMRIMAHVSGDQSLIDAFRSGQDFHTVTASHVFGVAPEDVSVAQRSKI
KAMNYGLAYGLSAYGLSNQLKVSVGEAKELMADYFSIFGKVHEYLEEVVDQARRQGYTET
LLGRRRYLPDLTSTNRQRREMAERAALNAPIQGSAADLIKLAMLATDEKLDEAGLTSRVL
LQVHDELILEVANGEEERVREIVTDAMVHAMELSVPLTVSIGVGRSWFDAAH
NT seq
2679 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagacgacgcagcccaccctcatggtcctcgacgggcattccatggccttccgg
gctttctatgccttgccggtggagaacttcatcacctcgacggaccagcacaccaatgcg
gtgcacggttttgtcgccatgctcatcaacctgctgcgcaacgaaaagcccacgcacatc
gcggtggcatgggaccttgccggcggtaccttccgaaccactgagtactccgagtacaag
gcgggacgagccgccactccgccggagttccccggccagatcgacctcatcaaggaggtc
ctcgacgccctccacatcgttcatctgtccaaggagaactacgaggccgatgacattctc
gccaccctgtccacccgagcgaccgctgaggggtttaagtccctgctcgtctcaggagac
cgggacgccatgcagctcgtcaatgaccaggtgacggttctctatccgcgcaagggtgtc
tcggacctcgcccgtatgacaccggaaggcgtcgaggagaagtacctcgtgccccccgcc
cgctaccctgagctggcggccttggtgggggagagcgctgaccatcttcccggcgttccc
ggggttggccccaagacggctgtgaagtggctcaacacctatgacggtctggagaacctc
attcgggaggctgacaccgtcaggggcaaggcaggccagtccttccgtgatcatctcgac
gacgtcattcgtaaccgcaagctcaacgccttggtccgtgacctcgacctcgacgtcacc
ctggccgaccttgctcgtcagccctgggatcccaaggccacccgcgcagtcttcgacacc
ctcgagttccgcaccctgtgggatcgtgtgcgtgcgctggcatccgagtcggatgccgac
gaggtcgtcgagattgacgaggccctagacgtctccggcgcggtgctcgagccgggcacc
ttgggagactggctctccacggcggaaggccggatcggtgttgacgtcacgggcacctgg
ggcagtgggtccggtgacgtggaggccgtggcgttgggagccggagacggcactgcggtg
tggttcgacacagctgatctcggcccgggtgacgagaaggcctttgcacaatggctggca
gacgaggcccacgcgaaggcgatgcattcggccaaggggccggtggaggcgttggccgag
cgcggctgggaggtcaaagggctcacctgtgacaccgagcttgcctcgtacctgctgcac
ccggatcgccgcactcacaagttcgacgacgcggtgcgcacccacctcaacgtcaccttg
ggtgagggggaggaacagtccgaccaggggatgctcgatttcggggacgaccggtccgcc
gaaaccatggagggggcggtggcggtcaccaagttggccgacgtcatggagaaggaggtc
gaggctcgcggcgggtccgagctgctccacgacgtcgagatgagggtgcagcggtgcctc
atctcgatggaacgggccggtatcgccgtcgacaccgacgtcctggaagggctgcgatcc
gaattcgacgagcgtgtcactcgcgcccaggaggctgcctgggaggcggctggtgagaag
atcaatctgtcctctcccaagcagttgcaggggatactcttcgacaagctcgacatgccg
aagacccggcgcaccaagtccggatacaccaccgacgccgatgcgctggctggtctgtac
gagaagaccgagcatcccttcctggcccatctgctggagcatcgcgatgccatcaagttg
cgtcagaccgtcgacggactgctcaaggaagttcgtgacgacggccgggtccacaccacc
tacatgcagacgatcgccgcgaccggacgcctgtcgagcaaggatccgaacctgcagaac
atccccatgcgcaccgaggagggacgacgcattcgggaaggattcgtcgtcggtgagggg
tatgagtccctcatgagtgccgactattcccagatcgagatgcggatcatggctcacgtc
tcgggggatcagtccctcatcgatgccttccggtctgggcaggatttccacacggtgacg
gcctcgcacgtcttcggagtggctcctgaggatgtcagtgtcgcccaacgttccaagatc
aaggccatgaactacggtctggcctacggcctgagcgcttatgggctgtccaaccagctc
aaggtgagcgtcggcgaggccaaggaactcatggctgattacttcagcattttcgggaag
gttcacgaatatctcgaggaggtcgtcgaccaagcccgtcgtcagggatacaccgagacc
ctgctgggacgccgtcgctaccttcctgacctcacctcgaccaatcgccagcgtcgcgag
atggcggaacgcgccgccctcaacgcacccatccagggatcggccgcagatctcatcaaa
ctcgccatgctcgccaccgacgagaaacttgacgaggctggtctgacgagtcgcgtcctg
ctgcaggtccatgacgaacttatcctcgaggtcgccaatggcgaggaggagagagtccgc
gagatcgtcaccgacgcgatggtccacgccatggaattgtcggtgccgctgacggtgtcg
attggcgtcggacggtcgtggttcgacgctgcgcactga
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